RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 CST3P01034 146 aaPredicted RBP12.34□□□□□ -0.43
RORA-207ENST00000558234 SERPING1P05155 500 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 ANXA13P27216 316 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 ZNF571Q7Z3V5 609 aaPredicted RBP12.34□□□□□ -0.43
RORA-207ENST00000558234 NEK11Q8NG66 645 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 APOBEC3GQ9HC16 384 aaKnown RBP12.34□□□□□ -0.43
RORA-207ENST00000558234 SALL4Q9UJQ4 1053 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 C2orf16Q68DN1 1984 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 EPOPA6NHQ4 379 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 SOX1O00570 391 aaPredicted RBP12.33□□□□□ -0.43
RORA-207ENST00000558234 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.43
RORA-207ENST00000558234 ACO1P21399 889 aaKnown RBP12.33□□□□□ -0.43
RORA-207ENST00000558234 PAX3P23760 479 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.43
RORA-207ENST00000558234 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 PLVAPQ9BX97 442 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 MTMR12Q9C0I1 747 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 CHST7Q9NS84 486 aa12.33□□□□□ -0.43
RORA-207ENST00000558234 NOCTQ9UK39 431 aaKnown RBP12.33□□□□□ -0.43
RORA-207ENST00000558234 ZC3H11AO75152 810 aaKnown RBP eCLIP12.33□□□□□ -0.44
RORA-207ENST00000558234 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
RORA-207ENST00000558234 THP07101 528 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 ASPAP45381 313 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 CLCNKBP51801 687 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 GPR153Q6NV75 609 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 TRAPPC11Q7Z392 1133 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 SHC3Q92529 594 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 FAM124BQ9H5Z6 455 aaPredicted RBP12.33□□□□□ -0.44
RORA-207ENST00000558234 GOLGA2P5Q9HBQ8 144 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
RORA-207ENST00000558234 KIF4AO95239 1232 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 FAM163BP0C2L3 166 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 FGFR3P22607 806 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 OSTNP61366 133 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 MYL7Q01449 175 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 GLB1LQ6UWU2 654 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 RTP3Q9BQQ7 232 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 LACRTQ9GZZ8 138 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 SLC38A7Q9NVC3 462 aa12.33□□□□□ -0.44
RORA-207ENST00000558234 NOTCH4Q99466 2003 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 DNAJB1P25685 340 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 RABGGTBP53611 331 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 BCAR1P56945 870 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 RRAGAQ7L523 313 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 SPATA18Q8TC71 538 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 GABRDO14764 452 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 AMPD2Q01433 879 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 KRT39Q6A163 491 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 HACE1Q8IYU2 909 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 WDR24Q96S15 920 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 DPP3Q9NY33 737 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 NRP1O14786 923 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 CTIFO43310 598 aaKnown RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 ZNF132P52740 706 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 ETF1P62495 437 aaKnown RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 PTK2Q05397 1052 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 KCNC3Q14003 757 aa12.32□□□□□ -0.44
RORA-207ENST00000558234 HELZP42694 1942 aaKnown RBP12.32□□□□□ -0.44
RORA-207ENST00000558234 CARNS1A5YM72 827 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 CCDC175P0C221 793 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 CHRNB2P17787 502 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 ATICP31939 592 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 SOX5P35711 763 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 EIF4A3P38919 411 aaKnown RBP12.31□□□□□ -0.44
RORA-207ENST00000558234 KIF11P52732 1056 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 YARSP54577 528 aaKnown RBP12.31□□□□□ -0.44
RORA-207ENST00000558234 GCNT1Q02742 428 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 SLC18A3Q16572 532 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 TRIM6Q9C030 488 aaPredicted RBP12.31□□□□□ -0.44
RORA-207ENST00000558234 PRUNE2Q8WUY3 3088 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 TBKBP1A7MCY6 615 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 POMCP01189 267 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 GCLMP48507 274 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 INCA1Q0VD86 236 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 GLRA4Q5JXX5 417 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 TAF4BQ92750 862 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 JAKMIP2Q96AA8 810 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 KIF12Q96FN5 646 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 SUSD3Q96L08 255 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 IRX2Q9BZI1 471 aaPredicted RBP12.31□□□□□ -0.44
RORA-207ENST00000558234 TTYH1Q9H313 450 aaPredicted RBP12.31□□□□□ -0.44
RORA-207ENST00000558234 TRMT1Q9NXH9 659 aaKnown RBP12.31□□□□□ -0.44
RORA-207ENST00000558234 CCP110O43303 1012 aa12.31□□□□□ -0.44
RORA-207ENST00000558234 ZSCAN12O43309 604 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms