RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 RPL17P18621 184 aaKnown RBP18■□□□□ 0.47
PBX4-202ENST00000557978 GTF2H1P32780 548 aa18■□□□□ 0.47
PBX4-202ENST00000557978 SKOR2Q2VWA4 1001 aaPredicted RBP18■□□□□ 0.47
PBX4-202ENST00000557978 ZACNQ401N2 412 aa18■□□□□ 0.47
PBX4-202ENST00000557978 CCDC40Q4G0X9 1142 aa18■□□□□ 0.47
PBX4-202ENST00000557978 CTXN3Q4LDR2 81 aa18■□□□□ 0.47
PBX4-202ENST00000557978 TDRD10Q5VZ19 366 aaKnown RBP18■□□□□ 0.47
PBX4-202ENST00000557978 OVOS1Q6IE37 1185 aa18■□□□□ 0.47
PBX4-202ENST00000557978 LLGL2Q6P1M3 1020 aa18■□□□□ 0.47
PBX4-202ENST00000557978 SV2AQ7L0J3 742 aa18■□□□□ 0.47
PBX4-202ENST00000557978 DPH6Q7L8W6 267 aa18■□□□□ 0.47
PBX4-202ENST00000557978 SLC22A17Q8WUG5 538 aa18■□□□□ 0.47
PBX4-202ENST00000557978 SRRTQ9BXP5 876 aaKnown RBP18■□□□□ 0.47
PBX4-202ENST00000557978 TIMM13Q9Y5L4 95 aaPredicted RBP18■□□□□ 0.47
PBX4-202ENST00000557978 SNX9Q9Y5X1 595 aa18■□□□□ 0.47
PBX4-202ENST00000557978 CDY1Q9Y6F8 540 aa18■□□□□ 0.47
PBX4-202ENST00000557978 C5orf42Q9H799 3197 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 GLP2RO95838 553 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 HOXB8P17481 243 aaPredicted RBP17.99■□□□□ 0.47
PBX4-202ENST00000557978 KCNA5P22460 613 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 OR1D2P34982 312 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 LTBRP36941 435 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 NCOA4Q13772 614 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 TPD52L1Q16890 204 aaPredicted RBP17.99■□□□□ 0.47
PBX4-202ENST00000557978 TCERG1LQ5VWI1 586 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 SLC8B1Q6J4K2 584 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 CAVIN1Q6NZI2 390 aaKnown RBP17.99■□□□□ 0.47
PBX4-202ENST00000557978 PALB2Q86YC2 1186 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 THEM5Q8N1Q8 247 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 TMEM86AQ8N2M4 240 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 HDAC7Q8WUI4 952 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 PLEKHA4Q9H4M7 779 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 TMEM8AQ9HCN3 771 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 DZANK1Q9NVP4 752 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 ANO10Q9NW15 660 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 DOCK6Q96HP0 2047 aa17.99■□□□□ 0.47
PBX4-202ENST00000557978 TBC1D4O60343 1298 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
PBX4-202ENST00000557978 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 RAB33AQ14088 237 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 SGSM1Q2NKQ1 1148 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 WDR72Q3MJ13 1102 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 DCAF17Q5H9S7 520 aaPredicted RBP17.98■□□□□ 0.47
PBX4-202ENST00000557978 C1orf220Q5T0J3 134 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 KRT39Q6A163 491 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 TOP6BLQ8N6T0 577 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 SPATA18Q8TC71 538 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 ATXN2LQ8WWM7 1075 aaKnown RBP17.98■□□□□ 0.47
PBX4-202ENST00000557978 TAF4BQ92750 862 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 PRDM6Q9NQX0 595 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 FBXL5Q9UKA1 691 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 OR6C75A6NL08 312 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 TGM5O43548 720 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 TBX10O75333 385 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 CLSTN1O94985 981 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 EPCAMP16422 314 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 GCLMP48507 274 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 MARSP56192 900 aaKnown RBP17.98■□□□□ 0.47
PBX4-202ENST00000557978 MYL6P60660 151 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 TNNC1P63316 161 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 DLX2Q07687 328 aaPredicted RBP17.98■□□□□ 0.47
PBX4-202ENST00000557978 PPP3CAQ08209 521 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 ZNF699Q32M78 642 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 SCARA3Q6AZY7 606 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 ANKRD54Q6NXT1 300 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 LILRA6Q6PI73 481 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 VN1R2Q8NFZ6 395 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 ZNF461Q8TAF7 563 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 IMPG2Q9BZV3 1241 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 MMRN2Q9H8L6 949 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 VRTNQ9H8Y1 702 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 CLEC1BQ9P126 229 aa17.98■□□□□ 0.47
PBX4-202ENST00000557978 BARX2Q9UMQ3 279 aaPredicted RBP17.98■□□□□ 0.47
PBX4-202ENST00000557978 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
PBX4-202ENST00000557978 VNN1O95497 513 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 FAM163BP0C2L3 166 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 P4HA1P13674 534 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 PIK3CAP42336 1068 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 LHX1P48742 406 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 MXI1P50539 228 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 MRPS5P82675 430 aaKnown RBP17.97■□□□□ 0.47
PBX4-202ENST00000557978 RBM10P98175 930 aaKnown RBP17.97■□□□□ 0.47
PBX4-202ENST00000557978 MYL7Q01449 175 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 ROR1Q01973 937 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 STX1AQ16623 288 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 PUS10Q3MIT2 529 aaKnown RBP17.97■□□□□ 0.47
PBX4-202ENST00000557978 LEXMQ3ZCV2 418 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 ZNF667Q5HYK9 610 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 WSCD1Q658N2 575 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 TPGS2Q68CL5 300 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 RSPO2Q6UXX9 243 aaPredicted RBP17.97■□□□□ 0.47
PBX4-202ENST00000557978 CCDC150Q8NCX0 1101 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 MSLNLQ96KJ4 702 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 MMS19Q96T76 1030 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 MAN1C1Q9NR34 630 aa17.97■□□□□ 0.47
PBX4-202ENST00000557978 CD207Q9UJ71 328 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms