RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 TDRD10Q5VZ19 366 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 CEP135Q66GS9 1140 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 FUT10Q6P4F1 479 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 DCLRE1AQ6PJP8 1040 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 LIMS2Q7Z4I7 341 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 FAM186BQ8IYM0 893 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 HASPINQ8TF76 798 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 POF1BQ8WVV4 589 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 SLC35C1Q96A29 364 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 B3GALT6Q96L58 329 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 FAM193BQ96PV7 902 aaPredicted RBP9.74□□□□□ -0.85
CHD8-214ENST00000557727 TSG101Q99816 390 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 XYLT2Q9H1B5 865 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 DPP3Q9NY33 737 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 MTCH2Q9Y6C9 303 aa9.74□□□□□ -0.85
CHD8-214ENST00000557727 BICDL2A1A5D9 508 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 SYCE3A1L190 88 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 HIDE1A8MVS5 230 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 I3L4J1 428 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 M0QZQ0 153 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 LRRN2O75325 713 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 B3GAT3O94766 335 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 CST3P01034 146 aaPredicted RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 SOD2P04179 222 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 ITGB3P05106 788 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 DLATP10515 647 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 FGFR3P22607 806 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 POLR2BP30876 1174 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 VAMP7P51809 220 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 LILRA4P59901 499 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 TFAMQ00059 246 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 SURF1Q15526 300 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 STX1AQ16623 288 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 SKOR2Q2VWA4 1001 aaPredicted RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 ZSCAN23Q3MJ62 389 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 ZACNQ401N2 412 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 RTP2Q5QGT7 225 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 INTS8Q75QN2 995 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 TRAPPC11Q7Z392 1133 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 FILIP1Q7Z7B0 1213 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 TRIM59Q8IWR1 403 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 CSGALNACT2Q8N6G5 542 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 BEST2Q8NFU1 509 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 ENOX1Q8TC92 643 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 MYLIPQ8WY64 445 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 MRPL38Q96DV4 380 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 TMEM169Q96HH4 297 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 SUSD3Q96L08 255 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 HERC2P3Q9BVR0 1158 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 COLEC11Q9BWP8 271 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 SRRTQ9BXP5 876 aaKnown RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 LMAN2LQ9H0V9 348 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 ITGA11Q9UKX5 1188 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 FRMD4BQ9Y2L6 1034 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.73□□□□□ -0.85
CHD8-214ENST00000557727 IRAK3Q9Y616 596 aa9.73□□□□□ -0.85
CHD8-214ENST00000557727 GREB1Q4ZG55 1949 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 NOTCH4Q99466 2003 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 IKBKBO14920 756 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 TBC1D4O60343 1298 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 CTSAP10619 480 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 DSG1Q02413 1049 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 KCNC3Q14003 757 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 MRPL58Q14197 206 aaKnown RBP9.72□□□□□ -0.85
CHD8-214ENST00000557727 COL19A1Q14993 1142 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 PTPN14Q15678 1187 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 DUOXA2Q1HG44 320 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 CBWD6Q4V339 395 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 CBWD3Q5JTY5 395 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 CBWD5Q5RIA9 395 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 CDKAL1Q5VV42 579 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 SASS6Q6UVJ0 657 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 FRMD5Q7Z6J6 570 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 ADGRD2Q7Z7M1 963 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 VPS52Q8N1B4 723 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 LRRC52Q8N7C0 313 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 AUTS2Q8WXX7 1259 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 SYAP1Q96A49 352 aaPredicted RBP9.72□□□□□ -0.85
CHD8-214ENST00000557727 MRGPRX2Q96LB1 330 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 REPIN1Q9BWE0 567 aaKnown RBP9.72□□□□□ -0.85
CHD8-214ENST00000557727 TLR9Q9NR96 1032 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 SAMSN1Q9NSI8 373 aaKnown RBP9.72□□□□□ -0.85
CHD8-214ENST00000557727 ANO10Q9NW15 660 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 LMCD1Q9NZU5 365 aa9.72□□□□□ -0.85
CHD8-214ENST00000557727 C2orf71A6NGG8 1288 aa9.71□□□□□ -0.86
CHD8-214ENST00000557727 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
CHD8-214ENST00000557727 ADAM12O43184 909 aa9.71□□□□□ -0.86
CHD8-214ENST00000557727 XPOTO43592 962 aaKnown RBP9.71□□□□□ -0.86
CHD8-214ENST00000557727 STAU1O95793 577 aaKnown RBP9.71□□□□□ -0.86
CHD8-214ENST00000557727 TMEM191BP0C7N4 346 aa9.71□□□□□ -0.86
CHD8-214ENST00000557727 EPB41P11171 864 aaKnown RBP9.71□□□□□ -0.86
CHD8-214ENST00000557727 ZNF18P17022 549 aa9.71□□□□□ -0.86
CHD8-214ENST00000557727 TNNI1P19237 187 aa9.71□□□□□ -0.86
CHD8-214ENST00000557727 TKTP29401 623 aaKnown RBP9.71□□□□□ -0.86
CHD8-214ENST00000557727 GCLMP48507 274 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms