RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 A0A1B0GVL5 298 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 OR6C75A6NL08 312 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 PRRG1O14668 218 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 LDHAP00338 332 aaKnown RBP11.16□□□□□ -0.62
SHMT2-224ENST00000556737 RHOP08100 348 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 SLFN14P0C7P3 912 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 PAX3P23760 479 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 CMA1P23946 247 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 PLA2G5P39877 138 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 CCR2P41597 374 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 AFMP43652 599 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 TAF6P49848 677 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 KRT85P78386 507 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 ADCY1Q08828 1119 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 BMT2Q1RMZ1 405 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 CWF19L1Q69YN2 538 aaKnown RBP11.16□□□□□ -0.62
SHMT2-224ENST00000556737 STXBP4Q6ZWJ1 553 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 CBWD2Q8IUF1 395 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 GPD1LQ8N335 351 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 TTC9BQ8N6N2 239 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 ST13P5Q8NFI4 369 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-224ENST00000556737 SPATA32Q96LK8 384 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 MFSD14AQ96MC6 490 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
SHMT2-224ENST00000556737 OXCT2Q9BYC2 517 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-224ENST00000556737 GOLPH3LQ9H4A5 285 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 HSPBP1Q9NZL4 362 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 MAFFQ9ULX9 164 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 NUMBLQ9Y6R0 609 aa11.16□□□□□ -0.62
SHMT2-224ENST00000556737 PVALEFA0A1B0GWK0 134 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 MTMR11A4FU01 709 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 KIAA0391O15091 583 aaKnown RBP11.15□□□□□ -0.62
SHMT2-224ENST00000556737 LRG1P02750 347 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 ITGB3P05106 788 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 CEBPBP17676 345 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 POLR2BP30876 1174 aaKnown RBP11.15□□□□□ -0.62
SHMT2-224ENST00000556737 MYBPC2Q14324 1141 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 IER5LQ5T953 404 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 LMBRD2Q68DH5 695 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-224ENST00000556737 PARM1Q6UWI2 310 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 USP37Q86T82 979 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 NELFCDQ8IXH7 590 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 KIAA0895Q8NCT3 520 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 PRSS33Q8NF86 280 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 ING5Q8WYH8 240 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 FGF14Q92915 247 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 NXPE3Q969Y0 559 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 PGLYRP2Q96PD5 576 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 MTMR12Q9C0I1 747 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 GZF1Q9H116 711 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-224ENST00000556737 DNAJC25Q9H1X3 360 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 KCNH6Q9H252 994 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 CEP72Q9P209 647 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 SIX4Q9UIU6 781 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 ITGA11Q9UKX5 1188 aa11.15□□□□□ -0.62
SHMT2-224ENST00000556737 ZFP37Q9Y6Q3 630 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-224ENST00000556737 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-224ENST00000556737 KPNA7A9QM74 516 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 CYB561D2O14569 222 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 MOSPD3O75425 235 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 SRFP11831 508 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 NPR3P17342 541 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 FCARP24071 287 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 ELF1P32519 619 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 NDUFA8P51970 172 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 EPHA5P54756 1037 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 TFAMQ00059 246 aaKnown RBP11.14□□□□□ -0.63
SHMT2-224ENST00000556737 TWF1Q12792 350 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 GPR17Q13304 367 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 SV2CQ496J9 727 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 WSCD1Q658N2 575 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 TMC8Q8IU68 726 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 SUGP1Q8IWZ8 645 aaKnown RBP11.14□□□□□ -0.63
SHMT2-224ENST00000556737 C12orf56Q8IXR9 622 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 CEP57L1Q8IYX8 460 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 LRRC52Q8N7C0 313 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 TMEM105Q8N8V8 129 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 OR5B17Q8NGF7 314 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 TCEAL4Q96EI5 215 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 CORO1BQ9BR76 489 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
SHMT2-224ENST00000556737 LRRC3Q9BY71 257 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 ZCWPW1Q9H0M4 648 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 OBSL1O75147 1896 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 NUP210Q8TEM1 1887 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-224ENST00000556737 DMDP11532 3685 aa11.14□□□□□ -0.63
SHMT2-224ENST00000556737 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-224ENST00000556737 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 A0A1W2PQD8 194 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 KRBA1A5PL33 1030 aa11.13□□□□□ -0.63
SHMT2-224ENST00000556737 PTPN2P17706 415 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms