RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FAM186BQ8IYM0 893 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 DAW1Q8N136 415 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 SUMF1Q8NBK3 374 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 GDPD5Q8WTR4 605 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 SEPT1Q8WYJ6 367 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 LENG1Q96BZ8 264 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 FAM167AQ96KS9 214 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 IFT74Q96LB3 600 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 FIZ1Q96SL8 496 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 STRA6Q9BX79 667 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 KRTAP4-6Q9BYQ5 205 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 AZI2Q9H6S1 392 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 ATP6V0A4Q9HBG4 840 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 SRA1Q9HD15 236 aaKnown RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 XPNPEP3Q9NQH7 507 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 CYP26B1Q9NR63 512 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 USP18Q9UMW8 372 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 SIK3Q9Y2K2 1263 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 PPME1Q9Y570 386 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 PCDHGB7Q9Y5F8 929 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 EPN1Q9Y6I3 576 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-204ENST00000555890 MCM3APO60318 1980 aa7.39□□□□□ -1.23
SLIRP-204ENST00000555890 ZMYM2Q9UBW7 1377 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 MYO7AQ13402 2215 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 UMODL1Q5DID0 1318 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 IGKV6D-21A0A0A0MT36 114 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TLDC2A0PJX2 215 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CCDC169A6NNP5 214 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 LOC730098B7Z3J9 87 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 RNF225M0QZC1 329 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 SLC16A4O15374 487 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 MBTPS2O43462 519 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 ZNF862O60290 1169 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 EXOC3O60645 756 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 AKAP3O75969 853 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 STBD1O95210 358 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 GGPS1O95749 300 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CD4P01730 458 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 ZNF865P0CJ78 1059 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 KRT13P13646 458 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 UBA1P22314 1058 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CYP2C18P33260 490 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 PTGIRP43119 386 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 KLK7P49862 253 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 STAT5BP51692 787 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 POLGP54098 1239 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 NCKAP1LP55160 1127 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 ETF1P62495 437 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 GTF2BQ00403 316 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 INSM1Q01101 510 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 SP2Q02086 613 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 PRKCEQ02156 737 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TTLL4Q14679 1199 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CBX2Q14781 532 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 PPP2R5AQ15172 486 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TCERG1LQ5VWI1 586 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 PLA2G4FQ68DD2 849 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TMEM214Q6NUQ4 689 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 METTL7BQ6UX53 244 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 RAD9BQ6WBX8 426 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 GBP6Q6ZN66 633 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TOGARAM2Q6ZUX3 1019 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TRMT1LQ7Z2T5 733 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CCDC60Q8IWA6 550 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 C12orf56Q8IXR9 622 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 DHX37Q8IY37 1157 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 EXOC8Q8IYI6 725 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CCDC105Q8IYK2 499 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CCDC170Q8IYT3 715 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 ABRAQ8N0Z2 381 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TXLNBQ8N3L3 684 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 MORC4Q8TE76 937 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TMEM174Q8WUU8 243 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 MAML3Q96JK9 1138 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 NTPCRQ9BSD7 190 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TSEN34Q9BSV6 310 aaKnown RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 TTYH3Q9C0H2 523 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 BCAS3Q9H6U6 928 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 C12orf49Q9H741 205 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 KMT5AQ9NQR1 393 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 AGPAT3Q9NRZ7 376 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 FAM207AQ9NSI2 230 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-204ENST00000555890 DMAC2Q9NW81 257 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 CEP72Q9P209 647 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 GGT7Q9UJ14 662 aa7.38□□□□□ -1.23
SLIRP-204ENST00000555890 PHLPP2Q6ZVD8 1323 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 GSTTP1A0A1W2PQM5 241 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 GTPBP10A4D1E9 387 aaKnown RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 TMEM150BA6NC51 233 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MEN1O00255 615 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 NOP56O00567 594 aaKnown RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MAPK13O15264 365 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 KIF5CO60282 957 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 N4BP1O75113 896 aaKnown RBP7.37□□□□□ -1.23
SLIRP-204ENST00000555890 C1QL1O75973 258 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 MICAL2O94851 1124 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 NDUFA10O95299 355 aa7.37□□□□□ -1.23
SLIRP-204ENST00000555890 TXNP10599 105 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms