RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	RBM15	Q96T37	977 aa	Known RBP eCLIP	5.71	□□□□□ -1.49	2e-6	■□□□□ 9.1
KTN1-223	ENST00000555573	STARD7	Q9NQZ5	370 aa		5.71	□□□□□ -1.49
KTN1-223	ENST00000555573	LOC102724159	A0A0B4J2E5	919 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	KLRG2	A4D1S0	409 aa	Predicted RBP	5.71	□□□□□ -1.5
KTN1-223	ENST00000555573		M0QYG6	137 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	PARP1	P09874	1014 aa	Known RBP	5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	CKB	P12277	381 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	FCER1A	P12319	257 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	ACO1	P21399	889 aa	Known RBP	5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	SLC11A2	P49281	568 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	NHLH2	Q02577	135 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	PWP2	Q15269	919 aa	Known RBP	5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	GORAB	Q5T7V8	394 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	C1orf228	Q6PIY5	440 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	SPOCD1	Q6ZMY3	1216 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573		Q6ZRM9	215 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	DNER	Q8NFT8	737 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	KIAA1191	Q96A73	305 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	MNT	Q99583	582 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	GPR87	Q9BY21	358 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	MYH16	Q9H6N6	1097 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	GPRC5B	Q9NZH0	403 aa		5.71	□□□□□ -1.5
KTN1-223	ENST00000555573	TMEM233	B4DJY2	109 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	KIF20A	O95235	890 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	TH	P07101	528 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	GRP	P07492	148 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	PIM1	P11309	404 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	GCSH	P23434	173 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	APOBEC3A	P31941	199 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	SCNN1G	P51170	649 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	UCP3	P55916	312 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	HTRA4	P83105	476 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	ICAM4	Q14773	271 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	KRTAP19-4	Q3LI73	84 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	LONRF3	Q496Y0	759 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	MAMDC4	Q6UXC1	1216 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	HTR3D	Q70Z44	454 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	SMC5	Q8IY18	1101 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	SLC15A4	Q8N697	577 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	DNAJC5G	Q8N7S2	189 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	NUP133	Q8WUM0	1156 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	MARS2	Q96GW9	593 aa	Known RBP	5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	WWC2-AS2	Q96NR7	200 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	CERS4	Q9HA82	394 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	PTPRH	Q9HD43	1115 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	CDYL	Q9Y232	598 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573	PLEKHM1	Q9Y4G2	1056 aa		5.7	□□□□□ -1.5
KTN1-223	ENST00000555573		A0A087WWL8	130 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	CCDC78	A2IDD5	438 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	ZNF623	O75123	536 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	EIF3J	O75822	258 aa	Known RBP	5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	CHEK2	O96017	543 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	STK3	Q13188	491 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	RAB32	Q13637	225 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	PMS2P11	Q13670	270 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	IZUMO3	Q5VZ72	239 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	TSHZ3	Q63HK5	1081 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	NAIF1	Q69YI7	327 aa	Predicted RBP	5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	PPP1R32	Q7Z5V6	425 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	MPP5	Q8N3R9	675 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	FAM46D	Q8NEK8	389 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	DDX17	Q92841	729 aa	Known RBP	5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	BRIP1	Q9BX63	1249 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	ZNF518B	Q9C0D4	1074 aa		5.69	□□□□□ -1.5
KTN1-223	ENST00000555573	VSX1	Q9NZR4	365 aa	Predicted RBP	5.69	□□□□□ -1.5
KTN1-223	ENST00000555573		A0A0G2JLL6	359 aa	Predicted RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	IFRD1	O00458	451 aa	Predicted RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	APOL1	O14791	398 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	ZNF185	O15231	689 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	ITGB3	P05106	788 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	ABCB4	P21439	1286 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	MAN2A2	P49641	1150 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	POU6F2	P78424	691 aa	Predicted RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	CHAF1A	Q13111	956 aa	Predicted RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	FAM83B	Q5T0W9	1011 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	AGAP9	Q5VTM2	703 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	CERS3	Q8IU89	383 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	RHOT2	Q8IXI1	618 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	CFAP52	Q8N1V2	620 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	ENAH	Q8N8S7	591 aa	Predicted RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	NSUN7	Q8NE18	718 aa	Known RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	OR56A3	Q8NH54	315 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	FAM89A	Q96GI7	184 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	VPS11	Q9H270	941 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	PADI4	Q9UM07	663 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	JAG2	Q9Y219	1238 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	TMX2	Q9Y320	296 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	USP15	Q9Y4E8	981 aa	Predicted RBP	5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	AATK	Q6ZMQ8	1374 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	GOLGA6L6	A8MZA4	724 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	PYCARD-AS1	I3L0S3	204 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	VPS4B	O75351	444 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	FGF18	O76093	207 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	IL1R1	P14778	569 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	FDXR	P22570	491 aa		5.68	□□□□□ -1.5
KTN1-223	ENST00000555573	HIBADH	P31937	336 aa	Known RBP	5.68	□□□□□ -1.5

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