RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 EHD3Q9NZN3 535 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 NR2E3Q9Y5X4 410 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 ADGRA2Q96PE1 1338 aa4.4□□□□□ -1.71
SRP54-207ENST00000555535 E7ENX8 843 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 DNAJB5O75953 348 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 HAUS5O94927 633 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 NR2F6P10588 404 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 NDUFB7P17568 137 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 CREMQ03060 361 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 TAP2Q03519 686 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 ERV3-1Q14264 604 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 CT83Q5H943 113 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 MUM1L1Q5H9M0 696 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 BROXQ5VW32 411 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 C16orf86Q6ZW13 317 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 ZNF551Q7Z340 670 aaPredicted RBP4.39□□□□□ -1.71
SRP54-207ENST00000555535 RFKQ969G6 155 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 VCPIP1Q96JH7 1222 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 ACAP3Q96P50 834 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 MYOCQ99972 504 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.39□□□□□ -1.71
SRP54-207ENST00000555535 DPP7Q9UHL4 492 aa4.39□□□□□ -1.71
SRP54-207ENST00000555535 NOTCH4Q99466 2003 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 VWC2LB2RUY7 222 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 ADAMTS3O15072 1205 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 GPR32O75388 356 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 NXPH3O95157 252 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 FKBP9O95302 570 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 FAM163BP0C2L3 166 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 ZFXP17010 805 aaPredicted RBP4.38□□□□□ -1.71
SRP54-207ENST00000555535 BMPR2Q13873 1038 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 PDCD1Q15116 288 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.38□□□□□ -1.71
SRP54-207ENST00000555535 DACT2Q5SW24 774 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 FKBP9P1Q75LS8 142 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 IRF2BP2Q7Z5L9 587 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 HOMER1Q86YM7 354 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 NIM1KQ8IY84 436 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
SRP54-207ENST00000555535 EAF2Q96CJ1 260 aaPredicted RBP4.38□□□□□ -1.71
SRP54-207ENST00000555535 REPS1Q96D71 796 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 EMC7Q9NPA0 242 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 FANCLQ9NW38 375 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 TRNAU1APQ9NX07 287 aaKnown RBP4.38□□□□□ -1.71
SRP54-207ENST00000555535 CTTNBP2NLQ9P2B4 639 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 EDARQ9UNE0 448 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 ACTL7AQ9Y615 435 aa4.38□□□□□ -1.71
SRP54-207ENST00000555535 CCDC195A0A1B0GUA6 201 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 FPR1P21462 350 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 ARHGAP25P42331 645 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 IL2P60568 153 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
SRP54-207ENST00000555535 ADRM1Q16186 407 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 DALRD3Q5D0E6 543 aaKnown RBP4.37□□□□□ -1.71
SRP54-207ENST00000555535 ZNF628Q5EBL2 1059 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 FANCBQ8NB91 859 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 ZBTB21Q9ULJ3 1066 aa4.37□□□□□ -1.71
SRP54-207ENST00000555535 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.37□□□□□ -1.71
SRP54-207ENST00000555535 TCRBV7S2A1N4TA0A589 114 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 E5RJQ4 531 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 SMIM22K7EJ46 135 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 TOR1BO14657 336 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 KIAA0391O15091 583 aaKnown RBP4.36□□□□□ -1.71
SRP54-207ENST00000555535 SUN1O94901 812 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 ALPLP05186 524 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 MTHFD2P13995 350 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 GSPT1P15170 499 aaKnown RBP4.36□□□□□ -1.71
SRP54-207ENST00000555535 ENPP1P22413 925 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 MRPS9P82933 396 aaKnown RBP4.36□□□□□ -1.71
SRP54-207ENST00000555535 CDK17Q00537 523 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 PIGFQ07326 219 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 NPY5RQ15761 445 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 ANO4Q32M45 955 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 AARS2Q5JTZ9 985 aaKnown RBP4.36□□□□□ -1.71
SRP54-207ENST00000555535 ANKRD16Q6P6B7 361 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 C18orf65Q6ZTR6 163 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 PPM1KQ8N3J5 372 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 RBMXL3Q8N7X1 1067 aaKnown RBP4.36□□□□□ -1.71
SRP54-207ENST00000555535 NRACQ8N912 160 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 OR2W6PQ8NHA6 318 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 AUTS2Q8WXX7 1259 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 SLC5A5Q92911 643 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 FKBP10Q96AY3 582 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 LDAHQ9H6V9 325 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 SCOCQ9UIL1 159 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 CDYLQ9Y232 598 aa4.36□□□□□ -1.71
SRP54-207ENST00000555535 BCAR3O75815 825 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 PCSK1P29120 753 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 HNRNPMP52272 730 aaKnown RBP eCLIP4.35□□□□□ -1.71
SRP54-207ENST00000555535 MTM1Q13496 603 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 TEDDM1Q5T9Z0 273 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 ADHFE1Q8IWW8 467 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 AHI1Q8N157 1196 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 C16orf52Q8NHV5 167 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 APPBP2Q92624 585 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 WBP1Q96G27 269 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 FEZ1Q99689 392 aa4.35□□□□□ -1.71
SRP54-207ENST00000555535 PROCRQ9UNN8 238 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms