RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FECHP22830 423 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 PBX2P40425 430 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 USP8P40818 1118 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 RGS19P49795 217 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 RBP5P82980 135 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 CUL2Q13617 745 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 TIGD5Q53EQ6 642 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 SFMBT2Q5VUG0 894 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 TOGARAM2Q6ZUX3 1019 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 NT5DC4Q86YG4 428 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 TWNKQ96RR1 684 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 MRPL45Q9BRJ2 306 aaKnown RBP11.54□□□□□ -0.56
TDP1-211ENST00000555178 STK33Q9BYT3 514 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 MYH10P35580 1976 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 EYSQ5T1H1 3165 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 TRIOBPQ9H2D6 2365 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 GALTP07902 379 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
TDP1-211ENST00000555178 CD58P19256 250 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 ACO1P21399 889 aaKnown RBP11.54□□□□□ -0.56
TDP1-211ENST00000555178 SOX5P35711 763 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 HTRA4P83105 476 aaPredicted RBP11.54□□□□□ -0.56
TDP1-211ENST00000555178 IRF2BP2Q7Z5L9 587 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 URGCPQ8TCY9 931 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 IQCDQ96DY2 449 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 IMPG2Q9BZV3 1241 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
TDP1-211ENST00000555178 A0A0U1RQJ8 604 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 CYP26A1O43174 497 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 B3GAT3O94766 335 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 HNRNPH3P31942 346 aaKnown RBP11.53□□□□□ -0.56
TDP1-211ENST00000555178 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
TDP1-211ENST00000555178 GCNT1Q02742 428 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
TDP1-211ENST00000555178 ASIC2Q16515 512 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 SOWAHAQ2M3V2 549 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 HS1BP3Q53T59 392 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 TDRD12Q587J7 1177 aaKnown RBP11.53□□□□□ -0.56
TDP1-211ENST00000555178 OSTM1Q86WC4 334 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 UBR7Q8N806 425 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 OLIG1Q8TAK6 271 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 ATRIPQ8WXE1 791 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 SHC3Q92529 594 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 RNPC3Q96LT9 517 aaKnown RBP11.53□□□□□ -0.56
TDP1-211ENST00000555178 YME1L1Q96TA2 773 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 GPR62Q9BZJ7 368 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 UBE2OQ9C0C9 1292 aaKnown RBP11.53□□□□□ -0.56
TDP1-211ENST00000555178 NIF3L1Q9GZT8 377 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 HAUS4Q9H6D7 363 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 L1RE1Q9UN81 338 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
TDP1-211ENST00000555178 USP27XA6NNY8 438 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 KPNA7A9QM74 516 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 KRT5P13647 590 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 STAT1P42224 750 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 MFAP3P55082 362 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 ZNF394Q53GI3 561 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 SLC47A2Q86VL8 602 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 DNAAF5Q86Y56 855 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 ACRBPQ8NEB7 543 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 WHAMMQ8TF30 809 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 SLC20A1Q8WUM9 679 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 KBTBD7Q8WVZ9 684 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 NHEJ1Q9H9Q4 299 aaPredicted RBP11.52□□□□□ -0.56
TDP1-211ENST00000555178 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 SLC38A7Q9NVC3 462 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 AIPL1Q9NZN9 384 aa11.52□□□□□ -0.56
TDP1-211ENST00000555178 YBX2Q9Y2T7 364 aaKnown RBP11.52□□□□□ -0.56
TDP1-211ENST00000555178 EFCAB14O75071 495 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 CFHP08603 1231 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 RFX1P22670 979 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 LMO2P25791 158 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 CLCN1P35523 988 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 EIF4A3P38919 411 aaKnown RBP11.52□□□□□ -0.57
TDP1-211ENST00000555178 PTK2Q05397 1052 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 ZNF667Q5HYK9 610 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 KIAA0319Q5VV43 1072 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 CYP26C1Q6V0L0 522 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 ZNF571Q7Z3V5 609 aaPredicted RBP11.52□□□□□ -0.57
TDP1-211ENST00000555178 CCDC112Q8NEF3 446 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 SENP8Q96LD8 212 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 MMS19Q96T76 1030 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 ZSWIM1Q9BR11 485 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 BCO2Q9BYV7 579 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 TFR2Q9UP52 801 aa11.52□□□□□ -0.57
TDP1-211ENST00000555178 ZNF263O14978 683 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 ATP2C2O75185 946 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 TAF6P49848 677 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 KLHL30Q0D2K2 578 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
TDP1-211ENST00000555178 WSCD1Q658N2 575 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 TMEM270Q6UE05 265 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 LIMS2Q7Z4I7 341 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 PALB2Q86YC2 1186 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 FAM71AQ8IYT1 594 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
TDP1-211ENST00000555178 LRRC52Q8N7C0 313 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms