RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NT5C1BQ96P26 610 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 PSMD1Q99460 953 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 ZSWIM1Q9BR11 485 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 PACSIN1Q9BY11 444 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 B3GNT5Q9BYG0 378 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 IKZF4Q9H2S9 585 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 SERHL2Q9H4I8 314 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 WDCPQ9H6R7 721 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 ARMT1Q9H993 441 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 SIDT1Q9NXL6 827 aaKnown RBP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 ANKFY1Q9P2R3 1169 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 ABCF2Q9UG63 623 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 STXBP5LQ9Y2K9 1186 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 MAP3K2Q9Y2U5 619 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 NR2E3Q9Y5X4 410 aa3.92□□□□□ -1.78
SCFD1-213ENST00000554776 WDR33Q9C0J8 1336 aaKnown RBP3.92□□□□□ -1.78
SCFD1-213ENST00000554776 A0A087X1B8 175 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 PRSS29PA6NIE9 313 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 PMM2O15305 246 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 B3GALT2O43825 422 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TUSC2O75896 110 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 SPDEFO95238 335 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 FCER1AP12319 257 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 GUCY1B3Q02153 619 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 RESTQ13127 1097 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 HDAC1Q13547 482 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TP53BP2Q13625 1128 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 PLS1Q14651 629 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 SAFBQ15424 915 aaKnown RBP eCLIP3.91□□□□□ -1.78
SCFD1-213ENST00000554776 KIAA0753Q2KHM9 967 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 CCDC93Q567U6 631 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 LAIR1Q6GTX8 287 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 CHST15Q7LFX5 561 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-213ENST00000554776 PPP1R3BQ86XI6 285 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TMIEQ8NEW7 156 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TBC1D15Q8TC07 691 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 FUBP1Q96AE4 644 aaKnown RBP3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TTPALQ9BTX7 342 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 C1orf43Q9BWL3 253 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TLR10Q9BXR5 811 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 WDR11Q9BZH6 1224 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 BHMT2Q9H2M3 363 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 MRPL46Q9H2W6 279 aaKnown RBP3.91□□□□□ -1.78
SCFD1-213ENST00000554776 LMBRD1Q9NUN5 540 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 TMEM74BQ9NUR3 256 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 RLIMQ9NVW2 624 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 HSFX1Q9UBD0 423 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 STAP2Q9UGK3 403 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 FEZ2Q9UHY8 353 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-213ENST00000554776 KCNE5Q9UJ90 142 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 SLC45A2Q9UMX9 530 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 RIPOR2Q9Y4F9 1068 aa3.91□□□□□ -1.78
SCFD1-213ENST00000554776 AATKQ6ZMQ8 1374 aa3.9□□□□□ -1.78
SCFD1-213ENST00000554776 PIPSLA2A3N6 862 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 UNC119BA6NIH7 251 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 PQBP1O60828 265 aaKnown RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 RAMP2O60895 175 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 CDKL5O76039 1030 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 AGFG2O95081 481 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 MATN4O95460 622 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 GPANK1O95872 356 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 LDHAP00338 332 aaKnown RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 IFIT2P09913 472 aaKnown RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 SMARCA1P28370 1054 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 PIK3CGP48736 1102 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 CXADRP78310 365 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 HSD11B2P80365 405 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 MXRA7P84157 204 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 TAP1Q03518 808 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 SCAPQ12770 1279 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 OS9Q13438 667 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 PICALMQ13492 652 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 BRD3Q15059 726 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 UTP14CQ5TAP6 766 aaKnown RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 SWSAP1Q6NVH7 229 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 Q6YL49 198 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 PDSS2Q86YH6 399 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 FAM43AQ8N2R8 423 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 KLHDC4Q8TBB5 520 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 ASB10Q8WXI3 467 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 TTC17Q96AE7 1141 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 SLC35A4Q96G79 324 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 MARS2Q96GW9 593 aaKnown RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 BOD1Q96IK1 185 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 CDK5RAP3Q96JB5 506 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 KLHL32Q96NJ5 620 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 PNKPQ96T60 521 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 NAA15Q9BXJ9 866 aaKnown RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 ALOXE3Q9BYJ1 711 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 FAM204AQ9H8W3 233 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 GPR35Q9HC97 309 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 DDX21Q9NR30 783 aaKnown RBP eCLIP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 SYBUQ9NX95 663 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 VSX1Q9NZR4 365 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-213ENST00000554776 DAAM1Q9Y4D1 1078 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 DMRT1Q9Y5R6 373 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 NOX1Q9Y5S8 564 aa3.9□□□□□ -1.79
SCFD1-213ENST00000554776 A0A088AWK7 358 aa3.89□□□□□ -1.79
SCFD1-213ENST00000554776 LOC102724159A0A0B4J2E5 919 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms