RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 KIF5BP33176 963 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 GNAQP50148 359 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 COPB1P53618 953 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 USP14P54578 494 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 PCBP3P57721 371 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 MECOMQ03112 1051 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 KARSQ15046 597 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SHHQ15465 462 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 MEA1Q16626 185 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 CCL14Q16627 93 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 TTC31Q49AM3 519 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 TIGD5Q53EQ6 642 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 TCP11X2Q5H9J9 407 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 RTP2Q5QGT7 225 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 TTC38Q5R3I4 469 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ALS2CLQ60I27 953 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 WWC2Q6AWC2 1192 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 MRM1Q6IN84 353 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 RAD9BQ6WBX8 426 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 MICALCLQ6ZW33 695 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ANKS3Q6ZW76 656 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SLC35F6Q8N357 371 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 EIF1ADQ8N9N8 165 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ARRDC4Q8NCT1 418 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 C1orf131Q8NDD1 294 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 TMEM52Q8NDY8 209 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ADCY4Q8NFM4 1077 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 TRIM58Q8NG06 486 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 COG1Q8WTW3 980 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 MYLIPQ8WY64 445 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 DHTKD1Q96HY7 919 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 AK8Q96MA6 479 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 EIF3CQ99613 913 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 MCMBPQ9BTE3 642 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 PAGR1Q9BTK6 254 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 LGR4Q9BXB1 951 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SLC12A9Q9BXP2 914 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 EDEM3Q9BZQ6 932 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 PORCNQ9H237 461 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 NOL6Q9H6R4 1146 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 PDE11AQ9HCR9 933 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 LZTFL1Q9NQ48 299 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ST7Q9NRC1 585 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SAMSN1Q9NSI8 373 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 CAPN11Q9UMQ6 739 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 RABGAP1Q9Y3P9 1069 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 EPN1Q9Y6I3 576 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 UNC80Q8N2C7 3258 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 PLXNB2O15031 1838 aa6.46□□□□□ -1.37
VPS33B-203ENST00000554264 A0A087WUV0 522 aaPredicted RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 GSG1L2A8MUP6 293 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 KCNJ18B7U540 433 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 KBTBD13C9JR72 458 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 ZEB2O60315 1214 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 MBD4O95243 580 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 HOXC6P09630 235 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 EPB41P11171 864 aaKnown RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 TCP1P17987 556 aaKnown RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 KRT9P35527 623 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 PRPHP41219 470 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 CORO7P57737 925 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 ZBED6P86452 979 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 AMPD3Q01432 767 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 PPARAQ07869 468 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 KCNJ12Q14500 433 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 RRP1BQ14684 758 aaKnown RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 PPP2R5DQ14738 602 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 TCEAL1Q15170 157 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 KRT31Q15323 416 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 SPA17Q15506 151 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 C9orf50Q5SZB4 431 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 ISM2Q6H9L7 571 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 EMBQ6PCB8 327 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 B4GALNT4Q76KP1 1039 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 CERS3Q8IU89 383 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 SUGP1Q8IWZ8 645 aaKnown RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 TEX11Q8IYF3 940 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 MMGT1Q8N4V1 131 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 C3orf20Q8ND61 904 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 FAM76AQ8TAV0 307 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 NSUN4Q96CB9 384 aaKnown RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 AIFM3Q96NN9 605 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 ALS2CR12Q96Q35 445 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 DESI2Q9BSY9 194 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 LRRC27Q9C0I9 530 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 TTYH1Q9H313 450 aaPredicted RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 DEF6Q9H4E7 631 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 PIH1D3Q9NQM4 214 aaKnown RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 GGA2Q9UJY4 613 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 FAM184BQ9ULE4 1060 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 ATP11BQ9Y2G3 1177 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 JRKLQ9Y4A0 524 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 PCDHB6Q9Y5E3 794 aa6.46□□□□□ -1.38
VPS33B-203ENST00000554264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
VPS33B-203ENST00000554264 H3BQF6 201 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 EBAG9O00559 213 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 SLC26A4O43511 780 aa6.45□□□□□ -1.38
VPS33B-203ENST00000554264 ORC4O43929 436 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms