RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 AVENQ9NQS1 362 aaPredicted RBP20.82■□□□□ 0.92
PTCH1-227ENST00000553256 TSHZ2Q9NRE2 1034 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 DNMT3BQ9UBC3 853 aaKnown RBP20.82■□□□□ 0.92
PTCH1-227ENST00000553256 ITGA11Q9UKX5 1188 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 CIZ1Q9ULV3 898 aaPredicted RBP20.82■□□□□ 0.92
PTCH1-227ENST00000553256 MYO10Q9HD67 2058 aa20.82■□□□□ 0.92
PTCH1-227ENST00000553256 OR6C75A6NL08 312 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 KPNA7A9QM74 516 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 NRG2O14511 850 aaPredicted RBP20.81■□□□□ 0.92
PTCH1-227ENST00000553256 CCL16O15467 120 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 ITGB3P05106 788 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 OR4Q2P0C623 313 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 POLR2BP30876 1174 aaKnown RBP20.81■□□□□ 0.92
PTCH1-227ENST00000553256 MCCD1P59942 119 aaPredicted RBP20.81■□□□□ 0.92
PTCH1-227ENST00000553256 CLDN10P78369 228 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 CYP24A1Q07973 514 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 PSMD6Q15008 389 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 TMEM31Q5JXX7 168 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 LMBRD2Q68DH5 695 aaPredicted RBP20.81■□□□□ 0.92
PTCH1-227ENST00000553256 OVOS1Q6IE37 1185 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 GRASPQ7Z6J2 395 aaPredicted RBP20.81■□□□□ 0.92
PTCH1-227ENST00000553256 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 ZNF516Q92618 1163 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 EXOC1Q9NV70 894 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 HCFC1R1Q9NWW0 138 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 GDAP2Q9NXN4 497 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 LIMD1Q9UGP4 676 aa20.81■□□□□ 0.92
PTCH1-227ENST00000553256 PRR33A8MZF0 331 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 CYB561D2O14569 222 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 ASGR2P07307 311 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 ODC1P11926 461 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 WSCD1Q658N2 575 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 HS2ST1Q7LGA3 356 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 WDR49Q8IV35 697 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 SMOC2Q9H3U7 446 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 AGAP1Q9UPQ3 857 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 TRAF3IP3Q9Y228 551 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 INSL5Q9Y5Q6 135 aa20.8■□□□□ 0.92
PTCH1-227ENST00000553256 SPDYE4A6NLX3 237 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 ANHXE9PGG2 379 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 PDXKO00764 312 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 PNPLA4P41247 253 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 ARPP19P56211 112 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 ADCY1Q08828 1119 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 SURF1Q15526 300 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 SLC5A9Q2M3M2 681 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 ZCWPW2Q504Y3 356 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 PRSS36Q5K4E3 855 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 CENPPQ6IPU0 288 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 TRIM67Q6ZTA4 783 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 LRRTM3Q86VH5 581 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 CACTINQ8WUQ7 758 aaKnown RBP20.79■□□□□ 0.92
PTCH1-227ENST00000553256 ZCWPW1Q9H0M4 648 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 L1RE1Q9UN81 338 aa20.79■□□□□ 0.92
PTCH1-227ENST00000553256 MTMR11A4FU01 709 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 LAMP2P13473 410 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 CYP2J2P51589 502 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 EPHA5P54756 1037 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 NFIL3Q16649 462 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 SV2CQ496J9 727 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 TRAPPC11Q7Z392 1133 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 BMP8AQ7Z5Y6 402 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 PDCL2Q8N4E4 241 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 RDH13Q8NBN7 331 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 ITFG1Q8TB96 612 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 GOLGA5Q8TBA6 731 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 ACSF2Q96CM8 615 aaPredicted RBP20.78■□□□□ 0.92
PTCH1-227ENST00000553256 ZNF560Q96MR9 790 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 PKMYT1Q99640 499 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 CGRRF1Q99675 332 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 LRRC3Q9BY71 257 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 DNAJC25Q9H1X3 360 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 KCNK12Q9HB15 430 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 PIDD1Q9HB75 910 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 CYP4F11Q9HBI6 524 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.78■□□□□ 0.92
PTCH1-227ENST00000553256 CEP72Q9P209 647 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 DSEQ9UL01 958 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 SORCS3Q9UPU3 1222 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 ZNF318Q5VUA4 2279 aa20.78■□□□□ 0.92
PTCH1-227ENST00000553256 GABRDO14764 452 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 XYLBO75191 536 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 MOSPD3O75425 235 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 CST3P01034 146 aaPredicted RBP20.77■□□□□ 0.92
PTCH1-227ENST00000553256 RBP5P82980 135 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 FAM160A1Q05DH4 1040 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 SIGLEC14Q08ET2 396 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 DUOXA2Q1HG44 320 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 C1orf220Q5T0J3 134 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 USP37Q86T82 979 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 OSTM1Q86WC4 334 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 ELOA2Q8IYF1 753 aaPredicted RBP20.77■□□□□ 0.92
PTCH1-227ENST00000553256 GUF1Q8N442 669 aaKnown RBP20.77■□□□□ 0.92
PTCH1-227ENST00000553256 CSGALNACT2Q8N6G5 542 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 TTC9BQ8N6N2 239 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 TIGD1Q96MW7 591 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 HSFX1Q9UBD0 423 aa20.77■□□□□ 0.92
PTCH1-227ENST00000553256 RHOP08100 348 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 FSHRP23945 695 aa20.76■□□□□ 0.91
PTCH1-227ENST00000553256 CCR2P41597 374 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms