RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, human

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAF11-215	ENST00000551391	RNF220	Q5VTB9	566 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	FNDC7	Q5VTL7	733 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	ARMC6	Q6NXE6	501 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	CCDC149	Q6ZUS6	474 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	IL31RA	Q8NI17	732 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	CPT1C	Q8TCG5	803 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	FBXO41	Q8TF61	875 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	KBTBD7	Q8WVZ9	684 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	TIFA	Q96CG3	184 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	PHACTR3	Q96KR7	559 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	KLHL32	Q96NJ5	620 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	C22orf23	Q9BZE7	217 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	SIK2	Q9H0K1	926 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	ZMAT3	Q9HA38	289 aa	Known RBP	4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	ARNT2	Q9HBZ2	717 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	TRPM5	Q9NZQ8	1165 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	DKK2	Q9UBU2	259 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	SLC45A2	Q9UMX9	530 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	PCDHA6	Q9UN73	950 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	MED16	Q9Y2X0	877 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	USP15	Q9Y4E8	981 aa	Predicted RBP	4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	DMRT1	Q9Y5R6	373 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391	FPGT-TNNI3K	V9GXZ4	949 aa		4.37	□□□□□ -1.71
SCAF11-215	ENST00000551391		A0A1B0GTW7	788 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391		A0A1W2PPL8	197 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	CFAP69	A5D8W1	941 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	MARCH11	A6NNE9	402 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	ISM1	B1AKI9	464 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	MYO1F	O00160	1098 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	PPFIA4	O75335	1185 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	RPS6KA4	O75676	772 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	GNAI2	P04899	355 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	CFI	P05156	583 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	KRT18	P05783	430 aa	Known RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	MYL1	P05976	194 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	TH	P07101	528 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	FCER1A	P12319	257 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	RPL17	P18621	184 aa	Known RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	HDC	P19113	662 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	BMPR1A	P36894	532 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	SOX8	P57073	446 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	SLC25A3	Q00325	362 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	PIGF	Q07326	219 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	SEMA5A	Q13591	1074 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	HABP2	Q14520	560 aa	Predicted RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	POLD3	Q15054	466 aa	Predicted RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	KIAA0753	Q2KHM9	967 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	APOA5	Q6Q788	366 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	LRRC55	Q6ZSA7	311 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	NOL8	Q76FK4	1167 aa	Known RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	C11orf96	Q7Z7L8	435 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	MAPKAPK5	Q8IW41	473 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	SLC17A8	Q8NDX2	589 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	TMIE	Q8NEW7	156 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	LRTOMT	Q8WZ04	291 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	FUBP1	Q96AE4	644 aa	Known RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	MARS2	Q96GW9	593 aa	Known RBP	4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	APIP	Q96GX9	242 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	SUCLG2	Q96I99	432 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	BOD1	Q96IK1	185 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	NT5C1B	Q96P26	610 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	TRIM54	Q9BYV2	358 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	DPH1	Q9BZG8	443 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	BHMT2	Q9H2M3	363 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	TMEM74B	Q9NUR3	256 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	TPCN1	Q9ULQ1	816 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	NEU2	Q9Y3R4	380 aa		4.36	□□□□□ -1.71
SCAF11-215	ENST00000551391	ANO9	A1A5B4	782 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	MYADML2	A6NDP7	307 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	TMEM191C	A6NGB0	347 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	ZNF785	A8K8V0	405 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391		E9PLN8	166 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	HLA-DOA	P06340	250 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	ELANE	P08246	267 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	MYF5	P13349	255 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	NPR1	P16066	1061 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	EN2	P19622	333 aa	Predicted RBP	4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	FGFR4	P22455	802 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	MXRA7	P84157	204 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	OCA2	Q04671	838 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	EXOSC9	Q06265	439 aa	Known RBP	4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	SAFB	Q15424	915 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	BEAN1	Q3B7T3	259 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	PPP1R32	Q7Z5V6	425 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	USP37	Q86T82	979 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	KRT78	Q8N1N4	520 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	CFAP52	Q8N1V2	620 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	TMEM132C	Q8N3T6	1108 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	ZNF276	Q8N554	614 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391		Q8NA96	180 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	PJA1	Q8NG27	643 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	LENG9	Q96B70	501 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	MYEOV	Q96EZ4	313 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	AGAP2	Q99490	1192 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	VKORC1	Q9BQB6	163 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	TTPAL	Q9BTX7	342 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	TLR10	Q9BXR5	811 aa		4.35	□□□□□ -1.71
SCAF11-215	ENST00000551391	IMPG2	Q9BZV3	1241 aa		4.35	□□□□□ -1.71

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