RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ALDH1A3P47895 512 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 EPHB3P54753 998 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 AMPD3Q01432 767 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 PRKCQQ04759 706 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 DUSP4Q13115 394 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 SNW1Q13573 536 aaKnown RBP21.5■■□□□ 1.03
CHD4-213ENST00000545584 CRELD2Q6UXH1 353 aaPredicted RBP21.5■■□□□ 1.03
CHD4-213ENST00000545584 ELSPBP1Q96BH3 223 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 TCEAL4Q96EI5 215 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 CUEDC2Q9H467 287 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 ZFP14Q9HCL3 533 aa21.5■■□□□ 1.03
CHD4-213ENST00000545584 CYB561D2O14569 222 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 SPTLC1O15269 473 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 CYP11A1P05108 521 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 GARTP22102 1010 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 STARD6P59095 220 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 ANGPT1Q15389 498 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 MLF2Q15773 248 aaPredicted RBP21.49■■□□□ 1.03
CHD4-213ENST00000545584 SLC44A4Q53GD3 710 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
CHD4-213ENST00000545584 HS6ST3Q8IZP7 471 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 THEM5Q8N1Q8 247 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
CHD4-213ENST00000545584 ZNF560Q96MR9 790 aa21.49■■□□□ 1.03
CHD4-213ENST00000545584 PYM1Q9BRP8 204 aaKnown RBP21.49■■□□□ 1.03
CHD4-213ENST00000545584 ANK1P16157 1881 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 GFRA3O60609 400 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 CUTAO60888 179 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 CASP5P51878 434 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 EPHA5P54756 1037 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 SV2CQ496J9 727 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 TANGO2Q6ICL3 276 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 CENPPQ6IPU0 288 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 BRSK2Q8IWQ3 736 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 EFCAB13Q8IY85 973 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 NOC3LQ8WTT2 800 aaKnown RBP21.48■■□□□ 1.03
CHD4-213ENST00000545584 CACTINQ8WUQ7 758 aaKnown RBP21.48■■□□□ 1.03
CHD4-213ENST00000545584 SAAL1Q96ER3 474 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 GPR88Q9GZN0 384 aa21.48■■□□□ 1.03
CHD4-213ENST00000545584 RBAKQ9NYW8 714 aaPredicted RBP21.48■■□□□ 1.03
CHD4-213ENST00000545584 MTMR11A4FU01 709 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 PROB1E7EW31 1015 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 PRPF6O94906 941 aaKnown RBP21.47■■□□□ 1.03
CHD4-213ENST00000545584 DCNP07585 359 aaKnown RBP21.47■■□□□ 1.03
CHD4-213ENST00000545584 PNPLA4P41247 253 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 NBL1P41271 181 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 CCR2P41597 374 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 TFAMQ00059 246 aaKnown RBP21.47■■□□□ 1.03
CHD4-213ENST00000545584 FAM78AQ5JUQ0 283 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 ATAD1Q8NBU5 361 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 PJA1Q8NG27 643 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 DHX58Q96C10 678 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 HSFX1Q9UBD0 423 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 SLC27A5Q9Y2P5 690 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 ASB3Q9Y575 518 aa21.47■■□□□ 1.03
CHD4-213ENST00000545584 KANSL1LA0AUZ9 987 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 KPNA7A9QM74 516 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 KIAA0391O15091 583 aaKnown RBP21.46■■□□□ 1.03
CHD4-213ENST00000545584 EXTL3O43909 919 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 VNN2O95498 520 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 ZSCAN22P10073 491 aaPredicted RBP21.46■■□□□ 1.03
CHD4-213ENST00000545584 TUFMP49411 452 aaKnown RBP21.46■■□□□ 1.03
CHD4-213ENST00000545584 ITIH5Q86UX2 942 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 OR10T2Q8NGX3 314 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 KCNG4Q8TDN1 519 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 SMARCD2Q92925 531 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 ASB16Q96NS5 453 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 TMEM209Q96SK2 561 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 PLA2G2FQ9BZM2 168 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 FOXQ1Q9C009 403 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 CRISPLD1Q9H336 500 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 SLITRK6Q9H5Y7 841 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 KBTBD4Q9NVX7 518 aa21.46■■□□□ 1.03
CHD4-213ENST00000545584 SCN1AP35498 2009 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 GOLGA8IPA6NC78 632 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 GOLGA8JA6NMD2 632 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 F13A1P00488 732 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 GJA1P17302 382 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 ASIC1P78348 528 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 SMARCB1Q12824 385 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 UBXN2BQ14CS0 331 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 TEAD2Q15562 447 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 E2F4Q16254 413 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 FOXD4L6Q3SYB3 417 aaPredicted RBP21.45■■□□□ 1.02
CHD4-213ENST00000545584 SLC39A12Q504Y0 691 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 POTEHQ6S545 545 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 FOXD4L3Q6VB84 417 aaPredicted RBP21.45■■□□□ 1.02
CHD4-213ENST00000545584 CBWD1Q9BRT8 395 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 TRMT61BQ9BVS5 477 aaKnown RBP21.45■■□□□ 1.02
CHD4-213ENST00000545584 FGFBP2Q9BYJ0 223 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 TRIM9Q9C026 710 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 ZCWPW1Q9H0M4 648 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 PCIF1Q9H4Z3 704 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 BRD9Q9H8M2 597 aa21.45■■□□□ 1.02
CHD4-213ENST00000545584 R3HCC1Q9Y3T6 440 aaKnown RBP21.45■■□□□ 1.02
CHD4-213ENST00000545584 MOSPD3O75425 235 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 FGF19O95750 216 aa21.44■■□□□ 1.02
CHD4-213ENST00000545584 FCARP24071 287 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms