RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 WDR49Q8IV35 697 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
YBX3-216ENST00000544622 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 GOLGA5Q8TBA6 731 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 MTMR12Q9C0I1 747 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 AVENQ9NQS1 362 aaPredicted RBP12.33□□□□□ -0.44
YBX3-216ENST00000544622 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 GDAP2Q9NXN4 497 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 EPS15L1Q9UBC2 864 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 DNMT3BQ9UBC3 853 aaKnown RBP12.33□□□□□ -0.44
YBX3-216ENST00000544622 LIMD1Q9UGP4 676 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
YBX3-216ENST00000544622 DMDP11532 3685 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 CST3P01034 146 aaPredicted RBP12.32□□□□□ -0.44
YBX3-216ENST00000544622 POLR2BP30876 1174 aaKnown RBP12.32□□□□□ -0.44
YBX3-216ENST00000544622 MCCD1P59942 119 aaPredicted RBP12.32□□□□□ -0.44
YBX3-216ENST00000544622 FAM160A1Q05DH4 1040 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 CYP24A1Q07973 514 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 NFIL3Q16649 462 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 DUOXA2Q1HG44 320 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 GRASPQ7Z6J2 395 aaPredicted RBP12.32□□□□□ -0.44
YBX3-216ENST00000544622 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 TDRD5Q8NAT2 981 aaKnown RBP12.32□□□□□ -0.44
YBX3-216ENST00000544622 OR10T2Q8NGX3 314 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 ACSF2Q96CM8 615 aaPredicted RBP12.32□□□□□ -0.44
YBX3-216ENST00000544622 TIGD1Q96MW7 591 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 MYADMQ96S97 322 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 TMEM209Q96SK2 561 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 CRISPLD1Q9H336 500 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.32□□□□□ -0.44
YBX3-216ENST00000544622 DSEQ9UL01 958 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 AGAP1Q9UPQ3 857 aa12.32□□□□□ -0.44
YBX3-216ENST00000544622 TECTAO75443 2155 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 PRR33A8MZF0 331 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 GABRDO14764 452 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 CCL16O15467 120 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 XYLBO75191 536 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 LAMP2P13473 410 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 CYP2J2P51589 502 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 ARPP19P56211 112 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 NTHL1P78549 312 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 RBP5P82980 135 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 ADCY1Q08828 1119 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 SV2CQ496J9 727 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 TMEM31Q5JXX7 168 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 WSCD1Q658N2 575 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 LMBRD2Q68DH5 695 aaPredicted RBP12.31□□□□□ -0.44
YBX3-216ENST00000544622 CENPPQ6IPU0 288 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 POTEHQ6S545 545 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 TRAPPC11Q7Z392 1133 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 BMP8AQ7Z5Y6 402 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 USP37Q86T82 979 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 LRRTM3Q86VH5 581 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 GUF1Q8N442 669 aaKnown RBP12.31□□□□□ -0.44
YBX3-216ENST00000544622 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 PARD3BQ8TEW8 1205 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 ASIC4Q96FT7 647 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 ZCWPW1Q9H0M4 648 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 KCNK12Q9HB15 430 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 PIDD1Q9HB75 910 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 HCFC1R1Q9NWW0 138 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 HSFX1Q9UBD0 423 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 SORCS3Q9UPU3 1222 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
YBX3-216ENST00000544622 DOCK6Q96HP0 2047 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 MTMR11A4FU01 709 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 EXOC3O60645 756 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
YBX3-216ENST00000544622 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 ELF1P32519 619 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 SIGLEC14Q08ET2 396 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 PNOCQ13519 176 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 SOWAHAQ2M3V2 549 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 ZCWPW2Q504Y3 356 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 COBLL1Q53SF7 1204 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 PRSS36Q5K4E3 855 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 TRIM67Q6ZTA4 783 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 DPH6Q7L8W6 267 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 PDCL2Q8N4E4 241 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 TOP6BLQ8N6T0 577 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 NOC3LQ8WTT2 800 aaKnown RBP12.3□□□□□ -0.44
YBX3-216ENST00000544622 CCDC127Q96BQ5 260 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 ANKRD36BP1Q96IX9 119 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 GSDMAQ96QA5 445 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 CGRRF1Q99675 332 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 CEP72Q9P209 647 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 IGSF9Q9P2J2 1179 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 L1RE1Q9UN81 338 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 INSL5Q9Y5Q6 135 aa12.3□□□□□ -0.44
YBX3-216ENST00000544622 ZFP37Q9Y6Q3 630 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms