RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	MRPS18A	Q9NVS2	196 aa	Known RBP	6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	CTTNBP2NL	Q9P2B4	639 aa		6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	MTO1	Q9Y2Z2	717 aa	Known RBP	6.61	□□□□□ -1.35
LEMD3-205	ENST00000544506	CFAP69	A5D8W1	941 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	UNC119B	A6NIH7	251 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	TMEM200C	A6NKL6	621 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	NPIPB8	E9PQR5	432 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506		M0QYG6	137 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZNF202	O95125	648 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	HRG	P04196	525 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	KIT	P10721	976 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	RHCE	P18577	417 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	DDX6	P26196	483 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	BMPR1A	P36894	532 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	KCNJ5	P48544	419 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	MXRA7	P84157	204 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	RHD	Q02161	417 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	PIGF	Q07326	219 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	ZNF844	Q08AG5	666 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	HABP2	Q14520	560 aa	Predicted RBP	6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	PPP4R4	Q6NUP7	873 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	TAPT1	Q6NXT6	567 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	APOA5	Q6Q788	366 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	MRGPRE	Q86SM8	312 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506		Q8NA96	180 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	IL31RA	Q8NI17	732 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	CCDC136	Q96JN2	1154 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	P2RX7	Q99572	595 aa	Known RBP	6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	ALOXE3	Q9BYJ1	711 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	KRTAP9-3	Q9BYQ3	159 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	PIH1D1	Q9NWS0	290 aa	Known RBP	6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	NOX1	Q9Y5S8	564 aa		6.6	□□□□□ -1.35
LEMD3-205	ENST00000544506	CENPVL1	A0A0U1RR11	272 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	CCDC195	A0A1B0GUA6	201 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	NARS	O43776	548 aa	Known RBP	6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	PPFIA4	O75335	1185 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	CDKL5	O76039	1030 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	KIF20A	O95235	890 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	GNAL	P38405	381 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	CACNB3	P54284	484 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	POU6F2	P78424	691 aa	Predicted RBP	6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	CYP2A13	Q16696	494 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	KIAA0753	Q2KHM9	967 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	SPDYE7P	Q495Y7	208 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	RNF220	Q5VTB9	566 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	KCNV1	Q6PIU1	500 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	USP37	Q86T82	979 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	NACC2	Q96BF6	587 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	LRIG1	Q96JA1	1093 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	TRIB1	Q96RU8	372 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	SMO	Q99835	787 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	CNPPD1	Q9BV87	410 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	MLST8	Q9BVC4	326 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	BHMT2	Q9H2M3	363 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	MMRN2	Q9H8L6	949 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	ETAA1	Q9NY74	926 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	MED16	Q9Y2X0	877 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	HS3ST4	Q9Y661	456 aa		6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
LEMD3-205	ENST00000544506	POLRMT	O00411	1230 aa	Known RBP	6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	DNAJB5	O75953	348 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	UNC5C	O95185	931 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	SPDEF	O95238	335 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	ABHD16A	O95870	558 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	C6	P13671	934 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	KCNA2	P16389	499 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	TACR2	P21452	398 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	FAM193A	P78312	1265 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	MC2R	Q01718	297 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	TCF15	Q12870	199 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	TP53BP2	Q13625	1128 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	GEN1	Q17RS7	908 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	ARMC6	Q6NXE6	501 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	PPP1R32	Q7Z5V6	425 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506		Q8N1X5	172 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	FAM43A	Q8N2R8	423 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	PROKR1	Q8TCW9	393 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	LRTOMT	Q8WZ04	291 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	ANKS1A	Q92625	1134 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	DDX17	Q92841	729 aa	Known RBP	6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	BOD1	Q96IK1	185 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	TRIM54	Q9BYV2	358 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	SIK2	Q9H0K1	926 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	ANKFY1	Q9P2R3	1169 aa		6.58	□□□□□ -1.36
LEMD3-205	ENST00000544506	VPS4B	O75351	444 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	SUN1	O94901	812 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	PIM1	P11309	404 aa	Predicted RBP	6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	SLC7A1	P30825	629 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	TBX4	P57082	545 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	GUCY1B3	Q02153	619 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	CCDC181	Q5TID7	509 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	DARS2	Q6PI48	645 aa	Known RBP	6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	SLC30A10	Q6XR72	485 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	DBX2	Q6ZNG2	339 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	ARHGEF19	Q8IW93	802 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	FAM46D	Q8NEK8	389 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	TTC17	Q96AE7	1141 aa		6.57	□□□□□ -1.36
LEMD3-205	ENST00000544506	GALNT9	Q9HCQ5	603 aa		6.57	□□□□□ -1.36

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