RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 GSTA5Q7RTV2 222 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 ERICH1Q86X53 443 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 VSIG1Q86XK7 387 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 ALLCQ8N6M5 410 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 PRCCQ92733 491 aaPredicted RBP14.52□□□□□ -0.09
VPS33A-208ENST00000543633 THOC1Q96FV9 657 aaKnown RBP14.52□□□□□ -0.09
VPS33A-208ENST00000543633 LRRC37BQ96QE4 947 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 MYLK2Q9H1R3 596 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 SAYSD1Q9NPB0 183 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.52□□□□□ -0.092e-6■■■■■ 149.1
VPS33A-208ENST00000543633 PARVAQ9NVD7 372 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 STK38LQ9Y2H1 464 aa14.52□□□□□ -0.09
VPS33A-208ENST00000543633 FER1L6Q2WGJ9 1857 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 HNRNPDLO14979 420 aaKnown RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ZWINTO95229 277 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 HLA-DRAP01903 254 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ASNSP08243 561 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ACO1P21399 889 aaKnown RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 IBSPP21815 317 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 PLA2G4FQ68DD2 849 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 TEX9Q8N6V9 391 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 FEZF2Q8TBJ5 459 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 LRRC8CQ8TDW0 803 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 BSNDQ8WZ55 320 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 LPAR1Q92633 364 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 HEMGNQ9BXL5 484 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 FRMD8P1Q9BZ68 369 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 RNPEPL1Q9HAU8 725 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ARHGAP28Q9P2N2 729 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 PSMC3IPQ9P2W1 217 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF70Q9UC06 446 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 STYXL1Q9Y6J8 313 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 TCP10L2B9ZVM9 353 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ALOX15BO15296 676 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 DGAT1O75907 488 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 CCNE2O96020 404 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 TSHRP16473 764 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 PIK3CAP42336 1068 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 RNASELQ05823 741 aaKnown RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 SPDYE2Q495Y8 402 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 SLC45A4Q5BKX6 768 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 DALRD3Q5D0E6 543 aaKnown RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 EFHC2Q5JST6 749 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ANKRD20A2Q5SQ80 823 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ANKRD20A1Q5TYW2 823 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ANKRD20A3Q5VUR7 823 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ANO5Q75V66 913 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 PCGF5Q86SE9 256 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 C10orf82Q8WW14 230 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ATP6V0A1Q93050 837 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 NKD2Q969F2 451 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 UTP4Q969X6 686 aaKnown RBP14.51□□□□□ -0.09
VPS33A-208ENST00000543633 ERP27Q96DN0 273 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 FAXDC2Q96IV6 333 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 PWWP2AQ96N64 755 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 SLITRK1Q96PX8 696 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 PCDH9Q9HC56 1237 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 SAR1AQ9NR31 198 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 CHKBQ9Y259 395 aa14.51□□□□□ -0.09
VPS33A-208ENST00000543633 A8MUI8 341 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 ABLIM1O14639 778 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 LMNAP02545 664 aaKnown RBP14.5□□□□□ -0.09
VPS33A-208ENST00000543633 C4BPAP04003 597 aaKnown RBP14.5□□□□□ -0.09
VPS33A-208ENST00000543633 ITGAVP06756 1048 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 PSEN1P49768 467 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 MAP3K10Q02779 954 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 TAP1Q03518 808 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 CUL2Q13617 745 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 LLGL1Q15334 1064 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 CYP4F22Q6NT55 531 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 CENPUQ71F23 418 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 ENDOVQ8N8Q3 282 aaKnown RBP14.5□□□□□ -0.09
VPS33A-208ENST00000543633 GPRASP2Q96D09 838 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 FNBP1Q96RU3 617 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 C11orf70Q9BRQ4 267 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 PI4K2AQ9BTU6 479 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 VPS33BQ9H267 617 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 TLE6Q9H808 572 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 CYLDQ9NQC7 956 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 PDLIM7Q9NR12 457 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 ZNF277Q9NRM2 450 aaPredicted RBP14.5□□□□□ -0.09
VPS33A-208ENST00000543633 DDX56Q9NY93 547 aaKnown RBP14.5□□□□□ -0.09
VPS33A-208ENST00000543633 LNPEPQ9UIQ6 1025 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 PCDHA10Q9Y5I2 948 aa14.5□□□□□ -0.09
VPS33A-208ENST00000543633 TMEM150BA6NC51 233 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 SMAPO00193 183 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 C2CD2LO14523 706 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 MAFGO15525 162 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 TYROBPO43914 113 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 PIGRP01833 764 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 GNAZP19086 355 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 CALB2P22676 271 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 GNA15P30679 374 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 DSG3P32926 999 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 VCPP55072 806 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 BLMHQ13867 455 aa14.49□□□□□ -0.09
VPS33A-208ENST00000543633 OASLQ15646 514 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 RNASEH2BQ5TBB1 312 aaKnown RBP14.49□□□□□ -0.09
VPS33A-208ENST00000543633 FAM47EQ6ZV65 393 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms