RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 FAM186AA6NE01 2351 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 FAM170BA6NMN3 283 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 MAN2B1O00754 1011 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 STAT6P42226 847 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 TAF6P49848 677 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 GUCY2FP51841 1108 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 SMARCB1Q12824 385 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 TANGO2Q6ICL3 276 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 USP49Q70CQ1 688 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 ITIH5Q86UX2 942 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 THEM5Q8N1Q8 247 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 IRF7Q92985 503 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 TCEAL4Q96EI5 215 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 BORCS6Q96GS4 357 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 PGLYRP2Q96PD5 576 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 ACCSQ96QU6 501 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 TRPV4Q9HBA0 871 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 OLFML3Q9NRN5 406 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 CEP72Q9P209 647 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
RTN3-212ENST00000543123 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 ANKRD63C9JTQ0 380 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 PIRO00625 290 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 LAMTOR5O43504 91 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 GCNT3O95395 438 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 LDHAP00338 332 aaKnown RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 LMNAP02545 664 aaKnown RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 CYP11A1P05108 521 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 PSMC3P17980 439 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 FCARP24071 287 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 PNPLA4P41247 253 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 CCR2P41597 374 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 TUFMP49411 452 aaKnown RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 CEBPZQ03701 1054 aaKnown RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 DUSP4Q13115 394 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 VEPH1Q14D04 833 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 SLC39A14Q15043 492 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 ZNF528Q3MIS6 628 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 SV2CQ496J9 727 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 L1TD1Q5T7N2 865 aaKnown RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 CENPPQ6IPU0 288 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 HS6ST3Q8IZP7 471 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 SYCP3Q8IZU3 236 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 ZSCAN18Q8TBC5 510 aaPredicted RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 C2orf15Q8WU43 125 aaKnown RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 LRRC27Q9C0I9 530 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 TRPV5Q9NQA5 729 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 SPATA6Q9NWH7 488 aaPredicted RBP14.19□□□□□ -0.14
RTN3-212ENST00000543123 DPP3Q9NY33 737 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 FBXO4Q9UKT5 387 aa14.19□□□□□ -0.14
RTN3-212ENST00000543123 MTMR11A4FU01 709 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 MYMKA6NI61 221 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
RTN3-212ENST00000543123 CYB561D2O14569 222 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 PPEF2O14830 753 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 STX6O43752 255 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 PPP1R37O75864 691 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 SP9P0CG40 484 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 IDEP14735 1019 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 RPS9P46781 194 aaKnown RBP14.18□□□□□ -0.14
RTN3-212ENST00000543123 ARHGAP15Q53QZ3 475 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 YAF2Q8IY57 180 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 ADSSL1Q8N142 457 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 PSMG2Q969U7 264 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 MSANTD3Q96H12 275 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 CLIC6Q96NY7 704 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 GCNAQ96QF7 691 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 IER2Q9BTL4 223 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 TMEM206Q9H813 350 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 FRYLO94915 3013 aa14.18□□□□□ -0.14
RTN3-212ENST00000543123 GVINP1Q7Z2Y8 2422 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 TISP43B9A030 160 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 ZNF263O14978 683 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 SPTLC1O15269 473 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
RTN3-212ENST00000543123 GLULP15104 373 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 GARTP22102 1010 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 GDI1P31150 447 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 GRM2Q14416 872 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 PPP2R5DQ14738 602 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 STK38Q15208 465 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 TEAD2Q15562 447 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 SLC39A12Q504Y0 691 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 FAM173BQ6P4H8 233 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 VITQ6UXI7 678 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 MFSD6LQ8IWD5 586 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 CCDC65Q8IXS2 484 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 SHKBP1Q8TBC3 707 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 SPPL2BQ8TCT7 592 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
RTN3-212ENST00000543123 CLDN23Q96B33 292 aa14.17□□□□□ -0.14
RTN3-212ENST00000543123 DNAJC19Q96DA6 116 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms