RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 FGF19O95750 216 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 OR4Q2P0C623 313 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 SATB1Q01826 763 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 DUSP4Q13115 394 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 GPR17Q13304 367 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 SIM2Q14190 667 aaPredicted RBP16.78■□□□□ 0.28
RTN3-211ENST00000542238 IL17AQ16552 155 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 ARMCX5Q6P1M9 558 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 SYT2Q8N9I0 419 aaPredicted RBP16.78■□□□□ 0.28
RTN3-211ENST00000542238 CDK5RAP3Q96JB5 506 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 TSPAN18Q96SJ8 248 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 MMTAG2Q9BU76 263 aaKnown RBP16.78■□□□□ 0.28
RTN3-211ENST00000542238 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
RTN3-211ENST00000542238 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
RTN3-211ENST00000542238 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
RTN3-211ENST00000542238 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 CNR2P34972 360 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 FCHO2Q0JRZ9 810 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 MYBPC2Q14324 1141 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 ARHGAP15Q53QZ3 475 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 DGKKQ5KSL6 1271 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 OVOS1Q6IE37 1185 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 HAUS6Q7Z4H7 955 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 TMC8Q8IU68 726 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 ARID3BQ8IVW6 561 aaPredicted RBP16.77■□□□□ 0.28
RTN3-211ENST00000542238 LRRC3Q9BY71 257 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
RTN3-211ENST00000542238 SLC27A5Q9Y2P5 690 aa16.77■□□□□ 0.28
RTN3-211ENST00000542238 NCANO14594 1321 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 ANK1P16157 1881 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 LACTBL1A8MY62 500 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 CHURC1-FNTBB4DL54 471 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 VNN2O95498 520 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 TYMPP19971 482 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 FNTBP49356 437 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 AARSP49588 968 aaKnown RBP eCLIP16.76■□□□□ 0.27
RTN3-211ENST00000542238 LIG4P49917 911 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 ZBTB6Q15916 424 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 ARHGAP29Q52LW3 1261 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 HYIQ5T013 277 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 CENPPQ6IPU0 288 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.76■□□□□ 0.27
RTN3-211ENST00000542238 ITIH5Q86UX2 942 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 RALGPS2Q86X27 583 aaPredicted RBP16.76■□□□□ 0.27
RTN3-211ENST00000542238 NETO1Q8TDF5 533 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 RSPRY1Q96DX4 576 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 PLIN2Q99541 437 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 DNAJC25Q9H1X3 360 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 ATXN3LQ9H3M9 355 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 RPF1Q9H9Y2 349 aaKnown RBP16.76■□□□□ 0.27
RTN3-211ENST00000542238 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
RTN3-211ENST00000542238 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.76■□□□□ 0.27
RTN3-211ENST00000542238 SPECC1L-ADORA2AF8WAN1 911 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 HNRNPDLO14979 420 aaKnown RBP16.75■□□□□ 0.27
RTN3-211ENST00000542238 PAPSS2O95340 614 aaPredicted RBP16.75■□□□□ 0.27
RTN3-211ENST00000542238 SEC24BO95487 1268 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 PLA2G4BP0C869 781 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 ODC1P11926 461 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 SCP2P22307 547 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 PAX3P23760 479 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 TNFSF9P41273 254 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 SOX9P48436 509 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 GAS6Q14393 721 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 STXBP5Q5T5C0 1151 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 MCTP1Q6DN14 999 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 DNAJB7Q7Z6W7 309 aaPredicted RBP16.75■□□□□ 0.27
RTN3-211ENST00000542238 GPIHBP1Q8IV16 184 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 ATAD1Q8NBU5 361 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 PSMG2Q969U7 264 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 PNMA5Q96PV4 448 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 HAPLN2Q9GZV7 340 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 CRISPLD1Q9H336 500 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 SEMA4GQ9NTN9 838 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 RBM12Q9NTZ6 932 aaKnown RBP16.75■□□□□ 0.27
RTN3-211ENST00000542238 PPP4R2Q9NY27 417 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 OBP2AQ9NY56 170 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
RTN3-211ENST00000542238 KIF26AQ9ULI4 1882 aaPredicted RBP16.74■□□□□ 0.27
RTN3-211ENST00000542238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.74■□□□□ 0.27
RTN3-211ENST00000542238 MYBPHLA2RUH7 354 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 MTMR11A4FU01 709 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 SLC30A4O14863 429 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 OGTO15294 1046 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 HRO43593 1189 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 FOXD2O60548 495 aaPredicted RBP16.74■□□□□ 0.27
RTN3-211ENST00000542238 GABRR2P28476 465 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 CTHP32929 405 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 SLC12A3P55017 1021 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 NCKAP1LP55160 1127 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 LILRA4P59901 499 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 ATP2C1P98194 919 aaPredicted RBP16.74■□□□□ 0.27
RTN3-211ENST00000542238 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
RTN3-211ENST00000542238 CSRP2Q16527 193 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 GPR158Q5T848 1215 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 HEATR6Q6AI08 1181 aaKnown RBP16.74■□□□□ 0.27
RTN3-211ENST00000542238 GAREM2Q75VX8 874 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 CEP68Q76N32 757 aa16.74■□□□□ 0.27
RTN3-211ENST00000542238 CD302Q8IX05 232 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms