RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MYL1P05976 194 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 RARBP10826 455 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 FCER1AP12319 257 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 DDX6P26196 483 aaKnown RBP eCLIP4.04□□□□□ -1.76
USP28-210ENST00000542033 BMPR1AP36894 532 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 PHKA1P46020 1223 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 KCNJ5P48544 419 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 RAB1AP62820 205 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 HSD11B2P80365 405 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 PURAQ00577 322 aaKnown RBP4.04□□□□□ -1.76
USP28-210ENST00000542033 OCA2Q04671 838 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 PIGFQ07326 219 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 DPTQ07507 201 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 ZNF844Q08AG5 666 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 BIRC2Q13490 618 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 ANO6Q4KMQ2 910 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 KHDC1LQ5JSQ8 128 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 RHOUQ7L0Q8 258 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 PPP1R3BQ86XI6 285 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 ULK2Q8IYT8 1036 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 CPEB3Q8NE35 698 aaKnown RBP4.04□□□□□ -1.76
USP28-210ENST00000542033 SCAMP4Q969E2 229 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 RNF31Q96EP0 1072 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 KLHL32Q96NJ5 620 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 MED15Q96RN5 788 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 SIK2Q9H0K1 926 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 MRPL46Q9H2W6 279 aaKnown RBP4.04□□□□□ -1.76
USP28-210ENST00000542033 PRDM11Q9NQV5 511 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 USP25Q9UHP3 1055 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 CPA4Q9UI42 421 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 SLC45A2Q9UMX9 530 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 MAP3K2Q9Y2U5 619 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 A0A088AWK7 358 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 A0A1W2PPL8 197 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 CAPN8A6NHC0 703 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 TMEM200CA6NKL6 621 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 CHEK2O96017 543 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 AHSGP02765 367 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 NR4A1P22736 598 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 ZNF135P52742 658 aaPredicted RBP4.03□□□□□ -1.76
USP28-210ENST00000542033 GPSM2P81274 684 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 TAP1Q03518 808 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 SLFN5Q08AF3 891 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 RESTQ13127 1097 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 KIF22Q14807 665 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 BEAN1Q3B7T3 259 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 MAP9Q49MG5 647 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 NPNTQ6UXI9 565 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.03□□□□□ -1.76
USP28-210ENST00000542033 OVCH2Q7RTZ1 564 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 MRGPRGQ86SM5 289 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 FAM43AQ8N2R8 423 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 TMEM132CQ8N3T6 1108 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 PDPRQ8NCN5 879 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 TMIEQ8NEW7 156 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 LARP4BQ92615 738 aaKnown RBP4.03□□□□□ -1.76
USP28-210ENST00000542033 DDX17Q92841 729 aaKnown RBP4.03□□□□□ -1.76
USP28-210ENST00000542033 RPS6KC1Q96S38 1066 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 SMOQ99835 787 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 TLR10Q9BXR5 811 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 B3GNT5Q9BYG0 378 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 ALOXE3Q9BYJ1 711 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 TMEM60Q9H2L4 133 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 RSAD1Q9HA92 442 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 ARNT2Q9HBZ2 717 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.03□□□□□ -1.76
USP28-210ENST00000542033 OBP2AQ9NY56 170 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 STAP2Q9UGK3 403 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 KCNE5Q9UJ90 142 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 ING1Q9UK53 422 aaPredicted RBP4.03□□□□□ -1.76
USP28-210ENST00000542033 PCDHA6Q9UN73 950 aa4.03□□□□□ -1.76
USP28-210ENST00000542033 FRMPD2Q68DX3 1309 aaPredicted RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 CLSPNQ9HAW4 1339 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 RAMP2O60895 175 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 CDKL5O76039 1030 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 RHOBTB3O94955 611 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 MATN4O95460 622 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 FOSP01100 380 aaPredicted RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 ELANEP08246 267 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 AVPR1BP47901 424 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 AGFG1P52594 562 aaKnown RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 SOX8P57073 446 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 CXADRP78310 365 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 BLOC1S1P78537 153 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 GUCY1B3Q02153 619 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 EXOSC9Q06265 439 aaKnown RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 OS9Q13438 667 aaPredicted RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 HABP2Q14520 560 aaPredicted RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 LLGL1Q15334 1064 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 GLIPR1L2Q4G1C9 344 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 ARHGEF19Q8IW93 802 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 COLGALT2Q8IYK4 626 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 CFAP52Q8N1V2 620 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 PCSK9Q8NBP7 692 aaKnown RBP4.02□□□□□ -1.77
USP28-210ENST00000542033 PLBD2Q8NHP8 589 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 LRFN3Q9BTN0 628 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 CNPPD1Q9BV87 410 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 ZNF700Q9H0M5 742 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 CYP4F11Q9HBI6 524 aa4.02□□□□□ -1.77
USP28-210ENST00000542033 GALNT9Q9HCQ5 603 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms