RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 LRFN3Q9BTN0 628 aa4.77□□□□□ -1.65
MDM2-227ENST00000540709 CPNE5Q9HCH3 593 aa4.77□□□□□ -1.65
MDM2-227ENST00000540709 GNL3LQ9NVN8 582 aaKnown RBP4.77□□□□□ -1.65
MDM2-227ENST00000540709 CTTNBP2NLQ9P2B4 639 aa4.77□□□□□ -1.65
MDM2-227ENST00000540709 ST3GAL5Q9UNP4 418 aa4.77□□□□□ -1.65
MDM2-227ENST00000540709 COX11Q9Y6N1 276 aa4.77□□□□□ -1.65
MDM2-227ENST00000540709 GJB1P08034 283 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 PPP3CBP16298 524 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 CHRM3P20309 590 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 PDCP20941 246 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 RECQLP46063 649 aaPredicted RBP4.76□□□□□ -1.65
MDM2-227ENST00000540709 ANXA11P50995 505 aaKnown RBP4.76□□□□□ -1.65
MDM2-227ENST00000540709 ZNF135P52742 658 aaPredicted RBP4.76□□□□□ -1.65
MDM2-227ENST00000540709 C21orf58P58505 322 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 DSC2Q02487 901 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 TSTD2Q5T7W7 516 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 VWA1Q6PCB0 445 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 C3orf20Q8ND61 904 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 NSUN6Q8TEA1 469 aaKnown RBP4.76□□□□□ -1.65
MDM2-227ENST00000540709 NTN5Q8WTR8 489 aaPredicted RBP4.76□□□□□ -1.65
MDM2-227ENST00000540709 TNPO1Q92973 898 aaKnown RBP4.76□□□□□ -1.65
MDM2-227ENST00000540709 PDLIM2Q96JY6 352 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 C1orf43Q9BWL3 253 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 HOMER2Q9NSB8 354 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 SLC17A6Q9P2U8 582 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 ABCF2Q9UG63 623 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 NEU2Q9Y3R4 380 aa4.76□□□□□ -1.65
MDM2-227ENST00000540709 LRRC3CA6NJW4 275 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 E9PLN8 166 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 C1RP00736 705 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 SRGNP10124 158 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 IL12RB1P42701 662 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 NPTX2P47972 431 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 MAPK10P53779 464 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 CACNA2D1P54289 1103 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 MICALCLQ6ZW33 695 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 PEG10Q86TG7 708 aaKnown RBP4.75□□□□□ -1.65
MDM2-227ENST00000540709 ZCRB1Q8TBF4 217 aaKnown RBP4.75□□□□□ -1.65
MDM2-227ENST00000540709 MYCBPAPQ8TBZ2 947 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 VOPP1Q96AW1 172 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 VKORC1Q9BQB6 163 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 ASPSCR1Q9BZE9 553 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 TPSD1Q9BZJ3 242 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 SLC13A1Q9BZW2 595 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 SMOC2Q9H3U7 446 aa4.75□□□□□ -1.65
MDM2-227ENST00000540709 LUC7L2Q9Y383 392 aaKnown RBP4.75□□□□□ -1.65
MDM2-227ENST00000540709 A0A0B4J269 797 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 DTNBO60941 627 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 ZRANB2O95218 330 aaKnown RBP eCLIP4.74□□□□□ -1.65
MDM2-227ENST00000540709 MATN4O95460 622 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 FTLP02792 175 aaPredicted RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 ANXA1P04083 346 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 IBSPP21815 317 aaPredicted RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 LMO1P25800 156 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 CYP2C19P33261 490 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 HNRNPMP52272 730 aaKnown RBP eCLIP4.74□□□□□ -1.65
MDM2-227ENST00000540709 KRT85P78386 507 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 EXOSC10Q01780 885 aaKnown RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 TUBB3Q13509 450 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 HEATR3Q7Z4Q2 680 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 GRASPQ7Z6J2 395 aaPredicted RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 CATIPQ7Z7H3 387 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 ZBTB46Q86UZ6 589 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 PCSK9Q8NBP7 692 aaKnown RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 SCAMP4Q969E2 229 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 RGMAQ96B86 450 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 ALG13Q9NP73 1137 aaKnown RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 MRPS18AQ9NVS2 196 aaKnown RBP4.74□□□□□ -1.65
MDM2-227ENST00000540709 CFAP97Q9P2B7 532 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 POLHQ9Y253 713 aa4.74□□□□□ -1.65
MDM2-227ENST00000540709 NT5C1B-RDH14C9J2C7 533 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 ADM5C9JUS6 153 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 MPPED1O15442 326 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 KIF20AO95235 890 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 RHOP08100 348 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 GRIA3P42263 894 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 PIK3CGP48736 1102 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 POU6F2P78424 691 aaPredicted RBP4.73□□□□□ -1.65
MDM2-227ENST00000540709 FAM153CQ494X1 144 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 BRDTQ58F21 947 aaPredicted RBP4.73□□□□□ -1.65
MDM2-227ENST00000540709 FAM9AQ8IZU1 332 aaPredicted RBP4.73□□□□□ -1.65
MDM2-227ENST00000540709 FAM98AQ8NCA5 519 aaKnown RBP4.73□□□□□ -1.65
MDM2-227ENST00000540709 PGBD1Q96JS3 809 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 AASDHPPTQ9NRN7 309 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 SEMA4GQ9NTN9 838 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 LMBRD1Q9NUN5 540 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 FEZ2Q9UHY8 353 aaPredicted RBP4.73□□□□□ -1.65
MDM2-227ENST00000540709 SPEF1Q9Y4P9 236 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 PCDHA1Q9Y5I3 950 aa4.73□□□□□ -1.65
MDM2-227ENST00000540709 COL11A2P13942 1736 aaPredicted RBP4.72□□□□□ -1.65
MDM2-227ENST00000540709 CCDC151A5D8V7 595 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 LINC00473A8K010 186 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 H3BUI4 141 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 TRIAP1O43715 76 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 GNAI2P04899 355 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 CT47B1P0C2W7 299 aaPredicted RBP4.72□□□□□ -1.65
MDM2-227ENST00000540709 NR2F6P10588 404 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 GPD1P21695 349 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 PRDX5P30044 214 aa4.72□□□□□ -1.65
MDM2-227ENST00000540709 NDUFV1P49821 464 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms