RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 EPHB6O15197 1021 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 MED7O43513 233 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 LRRN2O75325 713 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 POMCP01189 267 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 FGBP02675 491 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 CCDC175P0C221 793 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 CSF2RAP15509 400 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 TNFAIP3P21580 790 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 PRKCIP41743 596 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 BMS1Q14692 1282 aaKnown RBP10.8□□□□□ -0.68
LDHA-216ENST00000538451 DCLRE1AQ6PJP8 1040 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 DSTYKQ6XUX3 929 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 RTN4RL1Q86UN2 441 aaPredicted RBP10.8□□□□□ -0.68
LDHA-216ENST00000538451 ZSCAN30Q86W11 494 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 METTL23Q86XA0 190 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 ARHGEF19Q8IW93 802 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 APPL2Q8NEU8 664 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 SPATA18Q8TC71 538 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 SHC3Q92529 594 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 TATDN2Q93075 761 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 TRIM43Q96BQ3 446 aaPredicted RBP10.8□□□□□ -0.68
LDHA-216ENST00000538451 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.8□□□□□ -0.68
LDHA-216ENST00000538451 NHEJ1Q9H9Q4 299 aaPredicted RBP10.8□□□□□ -0.68
LDHA-216ENST00000538451 GDAP2Q9NXN4 497 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 SIX4Q9UIU6 781 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 CEP83Q9Y592 693 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 SNX9Q9Y5X1 595 aa10.8□□□□□ -0.68
LDHA-216ENST00000538451 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.8□□□□□ -0.688e-20■■■□□ 19
LDHA-216ENST00000538451 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
LDHA-216ENST00000538451 PODXLO00592 558 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 B3GAT3O94766 335 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 ALDH2P05091 517 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 PAEPP09466 180 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 GPNMBQ14956 572 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 STILQ15468 1287 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 LRIT3Q3SXY7 679 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 GJB7Q6PEY0 223 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 TMEM270Q6UE05 265 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 UNC93AQ86WB7 457 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 TMEM86AQ8N2M4 240 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 LRRC43Q8N309 656 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 TOP6BLQ8N6T0 577 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 C18orf25Q96B23 403 aaPredicted RBP10.79□□□□□ -0.68
LDHA-216ENST00000538451 TNIP3Q96KP6 325 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 COLEC11Q9BWP8 271 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 BCO2Q9BYV7 579 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 XYLT2Q9H1B5 865 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 SNX25Q9H3E2 840 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.79□□□□□ -0.684e-9■□□□□ 8.2
LDHA-216ENST00000538451 CISHQ9NSE2 258 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 STK39Q9UEW8 545 aa10.79□□□□□ -0.68
LDHA-216ENST00000538451 EPN1Q9Y6I3 576 aaPredicted RBP10.79□□□□□ -0.68
LDHA-216ENST00000538451 EIF3CLB5ME19 914 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 TACC1O75410 805 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 NDUFA10O95299 355 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 ODC1P11926 461 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 CD58P19256 250 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 LHX1P48742 406 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 ALDH7A1P49419 539 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 SNX16P57768 344 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 LILRA4P59901 499 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 CCZ1BP86790 482 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 CCZ1P86791 482 aaPredicted RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 GOLGA8FQ08AF8 430 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 GOLGA8DPQ0D2H9 430 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 ELAVL2Q12926 359 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 UPP1Q16831 310 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 SPOPLQ6IQ16 392 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 DPY19L2P1Q6NXN4 242 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 TRIM72Q6ZMU5 477 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 IRF2BP2Q7Z5L9 587 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 RBBP8NLQ8NC74 664 aaPredicted RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 GSTCDQ8NEC7 633 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 LINC01599Q8WXQ3 324 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 TOP1MTQ969P6 601 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 KREMEN1Q96MU8 473 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 ZNF830Q96NB3 372 aaPredicted RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 EIF3CQ99613 913 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 TMEM175Q9BSA9 504 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 NT5C1AQ9BXI3 368 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 OSBPL7Q9BZF2 842 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 HAUS4Q9H6D7 363 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 APOBEC3GQ9HC16 384 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 AAASQ9NRG9 546 aa10.78□□□□□ -0.68
LDHA-216ENST00000538451 SEPT11Q9NVA2 429 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 BARX2Q9UMQ3 279 aaPredicted RBP10.78□□□□□ -0.68
LDHA-216ENST00000538451 CEP290O15078 2479 aa10.77□□□□□ -0.69
LDHA-216ENST00000538451 ANK1P16157 1881 aa10.77□□□□□ -0.69
LDHA-216ENST00000538451 LTBP2Q14767 1821 aa10.77□□□□□ -0.69
LDHA-216ENST00000538451 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.77□□□□□ -0.69
LDHA-216ENST00000538451 CASTOR2A6NHX0 329 aa10.77□□□□□ -0.69
LDHA-216ENST00000538451 TBKBP1A7MCY6 615 aa10.77□□□□□ -0.69
LDHA-216ENST00000538451 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
LDHA-216ENST00000538451 ZBBXA8MT70 800 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms