RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 GPR88Q9GZN0 384 aa10.57□□□□□ -0.72
CTNND1-228ENST00000531007 XYLT2Q9H1B5 865 aa10.57□□□□□ -0.72
CTNND1-228ENST00000531007 NXF3Q9H4D5 531 aaKnown RBP10.57□□□□□ -0.72
CTNND1-228ENST00000531007 AGO3Q9H9G7 860 aaKnown RBP10.57□□□□□ -0.72
CTNND1-228ENST00000531007 PARP2Q9UGN5 583 aa10.57□□□□□ -0.72
CTNND1-228ENST00000531007 INTUQ9ULD6 942 aa10.57□□□□□ -0.72
CTNND1-228ENST00000531007 HTTP42858 3142 aa10.57□□□□□ -0.72
CTNND1-228ENST00000531007 CITO14578 2027 aa10.57□□□□□ -0.72
CTNND1-228ENST00000531007 ANK1P16157 1881 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 INPPL1O15357 1258 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 KRT86O43790 486 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 CST3P01034 146 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-228ENST00000531007 NFICP08651 508 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 CD52P31358 61 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
CTNND1-228ENST00000531007 PDE6CP51160 858 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 MMP16P51512 607 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 MYL6P60660 151 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 FAM189BP81408 668 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 KIF5AQ12840 1032 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 ARHGAP44Q17R89 818 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 LMBRD2Q68DH5 695 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-228ENST00000531007 SEPT8Q92599 483 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 KREMEN1Q96MU8 473 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 RPS6KC1Q96S38 1066 aa10.56□□□□□ -0.72
CTNND1-228ENST00000531007 ELAC1Q9H777 363 aaKnown RBP10.56□□□□□ -0.72
CTNND1-228ENST00000531007 ANO9A1A5B4 782 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 ARHGEF37A1IGU5 675 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 PJA2O43164 708 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 CXCL10P02778 98 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 ITGB3P05106 788 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 THP07101 528 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 KRT19P08727 400 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 GZMAP12544 262 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 LRPAP1P30533 357 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 RPIAP49247 311 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 VAV2P52735 878 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 APBA1Q02410 837 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 PTPN14Q15678 1187 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 NAB2Q15742 525 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 ZNF697Q5TEC3 545 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 GJB7Q6PEY0 223 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 TRIM72Q6ZMU5 477 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 DPH6Q7L8W6 267 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 NECAB2Q7Z6G3 386 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 CXorf38Q8TB03 319 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 HPDLQ96IR7 371 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 UROC1Q96N76 676 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 AGPAT1Q99943 283 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 ADAM2Q99965 735 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTNND1-228ENST00000531007 BCO2Q9BYV7 579 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 C11orf49Q9H6J7 331 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 SIX4Q9UIU6 781 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 KIAA1257Q9ULG3 409 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 NUB1Q9Y5A7 615 aa10.55□□□□□ -0.72
CTNND1-228ENST00000531007 CARNS1A5YM72 827 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 BTNL10A8MVZ5 291 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 PIRO00625 290 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 MEFVO15553 781 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 KIF5CO60282 957 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 LRRN2O75325 713 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 PAEPP09466 180 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 KRT5P13647 590 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 CYP11B1P15538 503 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 ACO1P21399 889 aaKnown RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 TNFAIP3P21580 790 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 AKAP5P24588 427 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 POLR2BP30876 1174 aaKnown RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 MAGEA1P43355 309 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 TNNC1P63316 161 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 CDR2Q01850 454 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 ARID5AQ03989 594 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 GRIK3Q13003 919 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 MTF1Q14872 753 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 IFI16Q16666 785 aaKnown RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 SV2CQ496J9 727 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 ZNF571Q7Z3V5 609 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 KIAA1328Q86T90 577 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 ECHDC2Q86YB7 292 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 UBR7Q8N806 425 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 PPP1R10Q96QC0 940 aaKnown RBP10.54□□□□□ -0.72
CTNND1-228ENST00000531007 SYT11Q9BT88 431 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 PI4K2AQ9BTU6 479 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 HIPK3Q9H422 1215 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 RSAD1Q9HA92 442 aa10.54□□□□□ -0.72
CTNND1-228ENST00000531007 APOBEC3GQ9HC16 384 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms