RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 ALDH2P05091 517 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 CD1AP06126 327 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 GNAI3P08754 354 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 MALP21145 153 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 HTR1BP28222 390 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 MAP2K6P52564 334 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 GNAI1P63096 354 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 DSC2Q02487 901 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 NOGQ13253 232 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 LLGL1Q15334 1064 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 METRNLQ641Q3 311 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 OTUD7BQ6GQQ9 843 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 MED25Q71SY5 747 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 PPP1R35Q8TAP8 253 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 C8orf48Q96LL4 319 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 TAAR9Q96RI9 348 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 SLC12A5Q9H2X9 1139 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 SARS2Q9NP81 518 aaKnown RBP4.85□□□□□ -1.63
CD44-219ENST00000525685 PNPOQ9NVS9 261 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 GEMIN8Q9NWZ8 242 aaKnown RBP4.85□□□□□ -1.63
CD44-219ENST00000525685 STXBP5LQ9Y2K9 1186 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 CCDC18Q5T9S5 1454 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 ABCA9Q8IUA7 1624 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 COL4A3Q01955 1670 aa4.85□□□□□ -1.63
CD44-219ENST00000525685 TSPOAP1O95153 1857 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 KIF14Q15058 1648 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 TTC37Q6PGP7 1564 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 MAGI3Q5TCQ9 1506 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 ATRNL1Q5VV63 1379 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 H3BML4 177 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 ZNF185O15231 689 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 GRM6O15303 877 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 UBXN7O94888 489 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 IL12RB1P42701 662 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 NANOS3P60323 173 aaKnown RBP4.84□□□□□ -1.63
CD44-219ENST00000525685 TLE1Q04724 770 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 SNAPC2Q13487 334 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 UBXN2BQ14CS0 331 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 FLYWCH1Q4VC44 716 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 PABPC1LQ4VXU2 614 aaKnown RBP4.84□□□□□ -1.63
CD44-219ENST00000525685 PDCD4Q53EL6 469 aaKnown RBP4.84□□□□□ -1.63
CD44-219ENST00000525685 FAM102AQ5T9C2 384 aaPredicted RBP4.84□□□□□ -1.63
CD44-219ENST00000525685 CCDC149Q6ZUS6 474 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 PLXDC1Q8IUK5 500 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 FITM2Q8N6M3 262 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 KLHDC4Q8TBB5 520 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
CD44-219ENST00000525685 ZG16BQ96DA0 208 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 FAM167AQ96KS9 214 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 MRGPRX4Q96LA9 322 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 NEU1Q99519 415 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 GSTO2Q9H4Y5 243 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 WDCPQ9H6R7 721 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 OBP2AQ9NY56 170 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 CPA4Q9UI42 421 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 PACSIN3Q9UKS6 424 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
CD44-219ENST00000525685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.83□□□□□ -1.64
CD44-219ENST00000525685 VPS8Q8N3P4 1428 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 WNT10BO00744 389 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 PRC1O43663 620 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 B3GALT2O43825 422 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 NDUFA10O95299 355 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 KRT18P05783 430 aaKnown RBP4.83□□□□□ -1.64
CD44-219ENST00000525685 BMPR1AP36894 532 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 KCNJ5P48544 419 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 HK3P52790 923 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 ATP8B2P98198 1209 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 FGL2Q14314 439 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 B3GNT9Q6UX72 402 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 KSR2Q6VAB6 950 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 SEM1Q6ZVN7 128 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 ARHGEF19Q8IW93 802 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 GPR150Q8NGU9 434 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 TBC1D15Q8TC07 691 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 SLC35A4Q96G79 324 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 PCGF6Q9BYE7 350 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 SERHL2Q9H4I8 314 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 BRD9Q9H8M2 597 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 STAP2Q9UGK3 403 aa4.83□□□□□ -1.64
CD44-219ENST00000525685 TROQ12816 1431 aaPredicted RBP4.82□□□□□ -1.64
CD44-219ENST00000525685 DRGXA6NNA5 263 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 MARCH11A6NNE9 402 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 CAND2O75155 1236 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 RHOBTB3O94955 611 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 FTH1P19P0C7X4 201 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 TYRP14679 529 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 ADRA1BP35368 520 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 ZEB1P37275 1124 aaPredicted RBP4.82□□□□□ -1.64
CD44-219ENST00000525685 PHKA1P46020 1223 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 CHN2P52757 468 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 NOMO3P69849 1222 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 MXRA7P84157 204 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 GRM3Q14832 879 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 KHDC1LQ5JSQ8 128 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 UTP14CQ5TAP6 766 aaKnown RBP4.82□□□□□ -1.64
CD44-219ENST00000525685 TSHZ3Q63HK5 1081 aa4.82□□□□□ -1.64
CD44-219ENST00000525685 FOXR2Q6PJQ5 311 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms