RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TINAGL1Q9GZM7 467 aaPredicted RBP6.41□□□□□ -1.38
SKP1-208ENST00000521216 SIK2Q9H0K1 926 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 NRDE2Q9H7Z3 1164 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 GPR35Q9HC97 309 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 USP19O94966 1318 aa6.41□□□□□ -1.38
SKP1-208ENST00000521216 UNC119BA6NIH7 251 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 PQBP1O60828 265 aaKnown RBP6.4□□□□□ -1.38
SKP1-208ENST00000521216 UNC5CO95185 931 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 HRGP04196 525 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 CFIP05156 583 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 BRAFP15056 766 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 NR4A1P22736 598 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 TUBA3CQ13748 450 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 HLTFQ14527 1009 aaKnown RBP eCLIP6.4□□□□□ -1.38
SKP1-208ENST00000521216 LSM12Q3MHD2 195 aaKnown RBP6.4□□□□□ -1.38
SKP1-208ENST00000521216 TIGD2Q4W5G0 525 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 EMC10Q5UCC4 262 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 TUBA3EQ6PEY2 450 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 FAM46DQ8NEK8 389 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 CACTINQ8WUQ7 758 aaKnown RBP6.4□□□□□ -1.38
SKP1-208ENST00000521216 DDX17Q92841 729 aaKnown RBP6.4□□□□□ -1.38
SKP1-208ENST00000521216 ZNF503Q96F45 646 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 TRIB1Q96RU8 372 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 CNPPD1Q9BV87 410 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 SARGQ9BW04 601 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 ALOXE3Q9BYJ1 711 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 SRRDQ9UH36 339 aa6.4□□□□□ -1.38
SKP1-208ENST00000521216 GAGE12BA1L429 117 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 C1QTNF3-AMACRE9PGA6 284 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 TOR1BO14657 336 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 CHEK2O96017 543 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 MYL1P05976 194 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 CHRM3P20309 590 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 DDX6P26196 483 aaKnown RBP eCLIP6.39□□□□□ -1.39
SKP1-208ENST00000521216 SUMO3P55854 103 aaPredicted RBP6.39□□□□□ -1.39
SKP1-208ENST00000521216 PUM1Q14671 1186 aaKnown RBP eCLIP6.39□□□□□ -1.391e-10■■□□□ 11.7
SKP1-208ENST00000521216 PREPLQ4J6C6 727 aaPredicted RBP6.39□□□□□ -1.39
SKP1-208ENST00000521216 TAPT1Q6NXT6 567 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 ZNF783Q6ZMS7 281 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 CCDC146Q8IYE0 955 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 OR6B3Q8NGW1 331 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 HAS1Q92839 578 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 MED15Q96RN5 788 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 LRRC27Q9C0I9 530 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 KIAA1586Q9HCI6 787 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 MRPS18AQ9NVS2 196 aaKnown RBP6.39□□□□□ -1.39
SKP1-208ENST00000521216 CPNE7Q9UBL6 633 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 OGDHLQ9ULD0 1010 aa6.39□□□□□ -1.39
SKP1-208ENST00000521216 CCDC195A0A1B0GUA6 201 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 MYO1CO00159 1063 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 BTN3A1O00481 513 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 APAF1O14727 1248 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 TBC1D4O60343 1298 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 LPXNO60711 386 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 GRPP07492 148 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 NBPF7P0C2Y1 421 aaPredicted RBP6.38□□□□□ -1.39
SKP1-208ENST00000521216 ZKSCAN1P17029 563 aaPredicted RBP6.38□□□□□ -1.39
SKP1-208ENST00000521216 CXADRP78310 365 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 FPGSQ05932 587 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 SEMA5AQ13591 1074 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 POLD3Q15054 466 aaPredicted RBP6.38□□□□□ -1.39
SKP1-208ENST00000521216 SAFBQ15424 915 aaKnown RBP eCLIP6.38□□□□□ -1.39
SKP1-208ENST00000521216 BEAN1Q3B7T3 259 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 AMOTQ4VCS5 1084 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 B3GNTL1Q67FW5 361 aaPredicted RBP6.38□□□□□ -1.39
SKP1-208ENST00000521216 CYB5RLQ6IPT4 315 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 LRRC55Q6ZSA7 311 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 FAM43AQ8N2R8 423 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 MPP5Q8N3R9 675 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 ZNF483Q8TF39 744 aaPredicted RBP6.38□□□□□ -1.39
SKP1-208ENST00000521216 VPS11Q9H270 941 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 ZNF287Q9HBT7 754 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 DDX21Q9NR30 783 aaKnown RBP eCLIP6.38□□□□□ -1.39
SKP1-208ENST00000521216 SACM1LQ9NTJ5 587 aa6.38□□□□□ -1.39
SKP1-208ENST00000521216 VSX1Q9NZR4 365 aaPredicted RBP6.38□□□□□ -1.39
SKP1-208ENST00000521216 TBX3O15119 743 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 CDKL5O76039 1030 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 MYF5P13349 255 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 TRIM27P14373 513 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 KCNA2P16389 499 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 ZFP36P26651 326 aaKnown RBP6.37□□□□□ -1.39
SKP1-208ENST00000521216 PTGS2P35354 604 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 PURAQ00577 322 aaKnown RBP6.37□□□□□ -1.39
SKP1-208ENST00000521216 ZXDCQ2QGD7 858 aaPredicted RBP6.37□□□□□ -1.39
SKP1-208ENST00000521216 CD300EQ496F6 205 aaPredicted RBP6.37□□□□□ -1.39
SKP1-208ENST00000521216 MIIPQ5JXC2 388 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 SLC15A4Q8N697 577 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 PJA1Q8NG27 643 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 FBXO41Q8TF61 875 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 KBTBD7Q8WVZ9 684 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 ANKS1AQ92625 1134 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 TMEM125Q96AQ2 219 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 MYEOVQ96EZ4 313 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 LRIG1Q96JA1 1093 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 TRIM54Q9BYV2 358 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 TTYH3Q9C0H2 523 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 ARNT2Q9HBZ2 717 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 ANKFY1Q9P2R3 1169 aa6.37□□□□□ -1.39
SKP1-208ENST00000521216 KCNE5Q9UJ90 142 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms