RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 M0QZ92 97 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 MCF2LO15068 1137 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 MYL3P08590 195 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 HSPA9P38646 679 aaKnown RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 RPL21P46778 160 aaKnown RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 ITGA8P53708 1063 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 TMEM132DQ14C87 1099 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 KIZQ2M2Z5 673 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 TTMPQ5BVD1 217 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 GLRA4Q5JXX5 417 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 NLRP14Q86W24 1093 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 MAP7D3Q8IWC1 876 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 PRELID2Q8N945 189 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 FAM49BQ9NUQ9 324 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 RGS17Q9UGC6 210 aaPredicted RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 POLIQ9UNA4 740 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 PCDHA3Q9Y5H8 950 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 GMNCA6NCL1 334 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 SOWAHBA6NEL2 793 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 B4GALT5O43286 388 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 PROSCO94903 275 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 YWHAGP61981 247 aaKnown RBP eCLIP10.75□□□□□ -0.69
MCF2-209ENST00000520602 LAMC2Q13753 1193 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 P3H1Q32P28 736 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 LRIG3Q6UXM1 1119 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 ARMCX2Q7L311 632 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 ZC3H18Q86VM9 953 aaKnown RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 EMC1Q8N766 993 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 CCDC63Q8NA47 563 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 ARHGEF2Q92974 986 aaKnown RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 PABPC3Q9H361 631 aaKnown RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 SNX25Q9H3E2 840 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 MROH8Q9H579 483 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 STAG3L1P0CL83 205 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 BRSK2Q8IWQ3 736 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 REPS2Q8NFH8 660 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 RNF34Q969K3 372 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 HPDLQ96IR7 371 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 CCT8L2Q96SF2 557 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 CNOT10Q9H9A5 744 aaKnown RBP10.75□□□□□ -0.69
MCF2-209ENST00000520602 CHST7Q9NS84 486 aa10.75□□□□□ -0.69
MCF2-209ENST00000520602 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 UMODL1Q5DID0 1318 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 TCRBV7S2A1N4TA0A589 114 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 DCAF8L1A6NGE4 600 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 AGPSO00116 658 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ASAP2O43150 1006 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 CAND2O75155 1236 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 RGS20O76081 388 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 CHRNB2P17787 502 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 IFRD2Q12894 506 aaPredicted RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 ATP13A4Q4VNC1 1196 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ZPBP2Q6X784 338 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 TMC3Q7Z5M5 1100 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 WDR49Q8IV35 697 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 PPP1R14CQ8TAE6 165 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ZBED3Q96IU2 234 aaPredicted RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 C12orf42Q96LP6 360 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ELAC2Q9BQ52 826 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 NTPCRQ9BSD7 190 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 C10orf71Q711Q0 1435 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 IQCA1LA6NCM1 817 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 CAPN9O14815 690 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 MAGEB2O15479 319 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 DDX3YO15523 660 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 CST3P01034 146 aaPredicted RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 PDGFRBP09619 1106 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 CELF3Q5SZQ8 465 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 EEF1DP3Q658K8 133 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 SLC39A4Q6P5W5 647 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 RCOR2Q8IZ40 523 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 DHX33Q9H6R0 707 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 TMBIM4Q9HC24 238 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 MAD1L1Q9Y6D9 718 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 A0A0B4J269 797 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 A6NJR5 290 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 H3BRB1 525 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 MAFO75444 373 aaPredicted RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 ITIH2P19823 946 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ADORA2BP29275 332 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ADCYAP1R1P41586 468 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 CDH6P55285 790 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 RTP1P59025 263 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ZBTB16Q05516 673 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 BYSLQ13895 437 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 AMHR2Q16671 573 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 TWF2Q6IBS0 349 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 CCDC91Q7Z6B0 441 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 EPS8L3Q8TE67 593 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 THOC1Q96FV9 657 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 CFAP57Q96MR6 1250 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 RBM15Q96T37 977 aaKnown RBP eCLIP10.74□□□□□ -0.69
MCF2-209ENST00000520602 GCOM2Q9BZD3 368 aaPredicted RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 NEUROG2Q9H2A3 272 aa10.74□□□□□ -0.69
MCF2-209ENST00000520602 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 NOCTQ9UK39 431 aaKnown RBP10.74□□□□□ -0.69
MCF2-209ENST00000520602 MYPNQ86TC9 1320 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms