RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 C3orf20Q8ND61 904 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ASAP3Q8TDY4 903 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 RIN2Q8WYP3 895 aaPredicted RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 LRRC45Q96CN5 670 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 FBXL18Q96ME1 805 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 FAM210AQ96ND0 272 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ZIM3Q96PE6 472 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ACCSQ96QU6 501 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 RPS6KC1Q96S38 1066 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 KRT12Q99456 494 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 NAP1L3Q99457 506 aaPredicted RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 PAIP2Q9BPZ3 127 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 NTPCRQ9BSD7 190 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 FAM129AQ9BZQ8 928 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 FAM107BQ9H098 131 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 KIAA1683Q9H0B3 1180 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 CHRDQ9H2X0 955 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 ZHX3Q9H4I2 956 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 BCAS3Q9H6U6 928 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 SLC38A10Q9HBR0 1119 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 TMBIM4Q9HC24 238 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 EPB41L5Q9HCM4 733 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 FAM114A2Q9NRY5 505 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 LARSQ9P2J5 1176 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 GGA2Q9UJY4 613 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 DNAJC12Q9UKB3 198 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 AMFRQ9UKV5 643 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 NOC2LQ9Y3T9 749 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 LCTP09848 1927 aa5.44□□□□□ -1.54
SDC2-204ENST00000519914 MYH9P35579 1960 aaKnown RBP5.44□□□□□ -1.54
SDC2-204ENST00000519914 COL11A1P12107 1806 aaPredicted RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 DOCK5Q9H7D0 1870 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 TCP10L2B9ZVM9 353 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 KCNK3O14649 394 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 EREGO14944 169 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 MAFGO15525 162 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 RPLP1P05386 114 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 PAEPP09466 180 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 FAM153BP0C7A2 387 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ALAS1P13196 640 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 KRT13P13646 458 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 DRD2P14416 443 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ERCC3P19447 782 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 KCNA3P22001 575 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 MPSTP25325 297 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CTNNA2P26232 953 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 SFNP31947 248 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 GBP1P32455 592 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 QARSP47897 775 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 VAMP7P51809 220 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 OAZ1P54368 228 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 NAP1L1P55209 391 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 CORO7P57737 925 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ZNF280AP59817 542 aaPredicted RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 PTENP60484 403 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 MRPS9P82933 396 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 MYL7Q01449 175 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CETN1Q12798 172 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 BIRC3Q13489 604 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 DHX34Q14147 1143 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 COG2Q14746 738 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 TNIP1Q15025 636 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CYP1B1Q16678 543 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 TKFCQ3LXA3 575 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 FAM153CQ494X1 144 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ODR4Q5SWX8 454 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CFAP58Q5T655 872 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 TCERG1LQ5VWI1 586 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 PHLDB3Q6NSJ2 640 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ZNF746Q6NUN9 644 aaPredicted RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 GJB7Q6PEY0 223 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CCDC174Q6PII3 467 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 XKR5Q6UX68 686 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 MIER3Q7Z3K6 550 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 PEX26Q7Z412 305 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 FAM71AQ8IYT1 594 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 SPICE1Q8N0Z3 855 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 TTLL6Q8N841 843 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 PRPF38AQ8NAV1 312 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 XXYLT1Q8NBI6 393 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CCDC26Q8TAB7 109 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 SLC35G2Q8TBE7 412 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 SYTL5Q8TDW5 730 aaPredicted RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 U2AF1L4Q8WU68 220 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 CTNNBL1Q8WYA6 563 aaPredicted RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 DHX38Q92620 1227 aaKnown RBP5.43□□□□□ -1.54
SDC2-204ENST00000519914 CD101Q93033 1021 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 NXPE3Q969Y0 559 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 ARL8AQ96BM9 186 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 FAM81BQ96LP2 452 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 C12orf42Q96LP6 360 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 RUNDC3BQ96NL0 473 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CAMKK2Q96RR4 588 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 PSMB7Q99436 277 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 AGPAT1Q99943 283 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 CAPS2Q9BXY5 557 aa5.43□□□□□ -1.54
SDC2-204ENST00000519914 PDLIM7Q9NR12 457 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms