RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ANKS1AQ92625 1134 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 LRIG1Q96JA1 1093 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 MED15Q96RN5 788 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 ETAA1Q9NY74 926 aa7.7□□□□□ -1.18
PTPN12-213ENST00000519553 FRS3O43559 492 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 LPXNO60711 386 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 NDUFA10O95299 355 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 CHEK2O96017 543 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 KITP10721 976 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 LAG3P18627 525 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 BMPR1AP36894 532 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 CXADRP78310 365 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 FAM193AP78312 1265 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 POU6F2P78424 691 aaPredicted RBP7.69□□□□□ -1.18
PTPN12-213ENST00000519553 PUM1Q14671 1186 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPN12-213ENST00000519553 CRIP3Q6Q6R5 217 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 TMPRSS9Q7Z410 1059 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 GGNQ86UU5 652 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 NACC2Q96BF6 587 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 P2RX7Q99572 595 aaKnown RBP7.69□□□□□ -1.18
PTPN12-213ENST00000519553 TRIM54Q9BYV2 358 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 NRDE2Q9H7Z3 1164 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 CNNM1Q9NRU3 951 aa7.69□□□□□ -1.18
PTPN12-213ENST00000519553 PIH1D1Q9NWS0 290 aaKnown RBP7.69□□□□□ -1.18
PTPN12-213ENST00000519553 CENPVL1A0A0U1RR11 272 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 CFAP69A5D8W1 941 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 MYO1FO00160 1098 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 NARSO43776 548 aaKnown RBP7.68□□□□□ -1.18
PTPN12-213ENST00000519553 KIF20AO95235 890 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 GNAI2P04899 355 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 DDX6P26196 483 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTPN12-213ENST00000519553 PTGS2P35354 604 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 CACNB3P54284 484 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 RESTQ13127 1097 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 SEMA5AQ13591 1074 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 CYP2A13Q16696 494 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 KIAA0753Q2KHM9 967 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 RNF220Q5VTB9 566 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 TAPT1Q6NXT6 567 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.68□□□□□ -1.18
PTPN12-213ENST00000519553 MRGPREQ86SM8 312 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 USP37Q86T82 979 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 NSUN7Q8NE18 718 aaKnown RBP7.68□□□□□ -1.18
PTPN12-213ENST00000519553 LRTOMTQ8WZ04 291 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 MLST8Q9BVC4 326 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 RNF181Q9P0P0 153 aa7.68□□□□□ -1.18
PTPN12-213ENST00000519553 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.68□□□□□ -1.18
PTPN12-213ENST00000519553 M0QYG6 137 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 GOLIM4O00461 696 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 PRC1O43663 620 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 CDKL5O76039 1030 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 PIM1P11309 404 aaPredicted RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 KCNA2P16389 499 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 TOB1P50616 345 aaPredicted RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 MC2RQ01718 297 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 PIGFQ07326 219 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 ZNF844Q08AG5 666 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 SCAPQ12770 1279 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 DARS2Q6PI48 645 aaKnown RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 FOXR2Q6PJQ5 311 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 Q8N1X5 172 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 PCSK9Q8NBP7 692 aaKnown RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 KBTBD7Q8WVZ9 684 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 HAS1Q92839 578 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 DDX17Q92841 729 aaKnown RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 FUBP1Q96AE4 644 aaKnown RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 TTC17Q96AE7 1141 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 BOD1Q96IK1 185 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 CNPPD1Q9BV87 410 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 SARGQ9BW04 601 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 DPH1Q9BZG8 443 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 TMEM74BQ9NUR3 256 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTPN12-213ENST00000519553 USP19O94966 1318 aa7.67□□□□□ -1.18
PTPN12-213ENST00000519553 CCDC195A0A1B0GUA6 201 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 A0A1W2PS29 197 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 UNC119BA6NIH7 251 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 NPIPB8E9PQR5 432 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 TBX3O15119 743 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 SUN1O94901 812 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 UNC5CO95185 931 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 SPDEFO95238 335 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 ABHD16AO95870 558 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 HLA-DOAP06340 250 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 EN2P19622 333 aaPredicted RBP7.66□□□□□ -1.18
PTPN12-213ENST00000519553 FDXRP22570 491 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 PEX2P28328 305 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 KCNJ5P48544 419 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 HLTFQ14527 1009 aaKnown RBP eCLIP7.66□□□□□ -1.18
PTPN12-213ENST00000519553 POLD3Q15054 466 aaPredicted RBP7.66□□□□□ -1.18
PTPN12-213ENST00000519553 TIGD2Q4W5G0 525 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 ARMC6Q6NXE6 501 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 RNF31Q96EP0 1072 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 CCDC136Q96JN2 1154 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 TRIB1Q96RU8 372 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 ALOXE3Q9BYJ1 711 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 MMRN2Q9H8L6 949 aa7.66□□□□□ -1.18
PTPN12-213ENST00000519553 MTO1Q9Y2Z2 717 aaKnown RBP7.66□□□□□ -1.18
PTPN12-213ENST00000519553 PCDHGB6Q9Y5F9 930 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms