RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CREMQ03060 361 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 STK3Q13188 491 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 FOXE3Q13461 319 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 UBXN2BQ14CS0 331 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 RABL3Q5HYI8 236 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 C1orf228Q6PIY5 440 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 UBE3BQ7Z3V4 1068 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 UBE2Q1Q7Z7E8 422 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 TTC7BQ86TV6 843 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 IFI44Q8TCB0 444 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 TTC17Q96AE7 1141 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 DMRTA2Q96SC8 542 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 NUP88Q99567 741 aaPredicted RBP6.84□□□□□ -1.31
SQLE-203ENST00000518931 CXorf56Q9H5V9 222 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 ZNF703Q9H7S9 590 aaPredicted RBP6.84□□□□□ -1.31
SQLE-203ENST00000518931 CEP72Q9P209 647 aa6.84□□□□□ -1.31
SQLE-203ENST00000518931 CFAP20Q9Y6A4 193 aaKnown RBP6.84□□□□□ -1.31
SQLE-203ENST00000518931 TCRBV7S2A1N4TA0A589 114 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 K7ENM7 598 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 PRPF3O43395 683 aaKnown RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 RECQL4O94761 1208 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 TNFAIP3P21580 790 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 SERPINB3P29508 390 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 PIK3CAP42336 1068 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 RENBPP51606 427 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 TOB2Q14106 344 aaPredicted RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 MINDY4Q4G0A6 757 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 KHDC1Q4VXA5 237 aaKnown RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 COBLL1Q53SF7 1204 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 ARMC3Q5W041 872 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 GADL1Q6ZQY3 521 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 SEM1Q6ZVN7 128 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 MED25Q71SY5 747 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 GGNQ86UU5 652 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 PLXDC1Q8IUK5 500 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 TPH2Q8IWU9 490 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 OR8H2Q8N162 312 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 CPT1CQ8TCG5 803 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 NSUN6Q8TEA1 469 aaKnown RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 TNIP3Q96KP6 325 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 MRGPRX4Q96LA9 322 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 FAM193BQ96PV7 902 aaPredicted RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 VRK1Q99986 396 aaPredicted RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 GTPBP4Q9BZE4 634 aaKnown RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 NLRC4Q9NPP4 1024 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 KMT5AQ9NQR1 393 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 SH3GLB2Q9NR46 395 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 RASSF1Q9NS23 344 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 PNMA8BQ9ULN7 279 aaPredicted RBP6.83□□□□□ -1.32
SQLE-203ENST00000518931 TTLL3Q9Y4R7 772 aa6.83□□□□□ -1.32
SQLE-203ENST00000518931 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 hCG_1984214I3L0E3 225 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
SQLE-203ENST00000518931 DTNBO60941 627 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 CYP2C19P33261 490 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 TSPAN7P41732 249 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 FXR1P51114 621 aaKnown RBP eCLIP6.82□□□□□ -1.326e-7■□□□□ 11.2
SQLE-203ENST00000518931 CHN2P52757 468 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 RNASE9P60153 205 aaKnown RBP6.82□□□□□ -1.32
SQLE-203ENST00000518931 RAB39AQ14964 217 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 ELF2Q15723 593 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 ATP2B3Q16720 1220 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 LVRNQ6Q4G3 990 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 DCBLD1Q8N8Z6 715 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 TIFAQ96CG3 184 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 ZNF503Q96F45 646 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 C11orf54Q9H0W9 315 aaPredicted RBP6.82□□□□□ -1.32
SQLE-203ENST00000518931 FBXO34Q9NWN3 711 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 CALCOCO1Q9P1Z2 691 aa6.82□□□□□ -1.32
SQLE-203ENST00000518931 AP1G1O43747 822 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 PSMA3P25788 255 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 SLC25A3Q00325 362 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 PGS1Q32NB8 556 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 IFIT1BQ5T764 474 aaKnown RBP6.81□□□□□ -1.32
SQLE-203ENST00000518931 DBX2Q6ZNG2 339 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 NKAIN3Q8N8D7 197 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 LRGUKQ96M69 825 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 DCLRE1CQ96SD1 692 aaKnown RBP6.81□□□□□ -1.32
SQLE-203ENST00000518931 ZNF747Q9BV97 191 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 GSTO2Q9H4Y5 243 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 TRPM5Q9NZQ8 1165 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 FAM30AQ9NZY2 134 aa6.81□□□□□ -1.32
SQLE-203ENST00000518931 ITIH6Q6UXX5 1313 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 LRRC14BA6NHZ5 514 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 AHRRA9YTQ3 701 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 TRIM24O15164 1050 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 MATN3O15232 486 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 OFD1O75665 1012 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 SBK3P0C264 359 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 SLC6A2P23975 617 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 ZBED6P86452 979 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 TLE1Q04724 770 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 DCTN1Q14203 1278 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 GBX1Q14549 363 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 MIIPQ5JXC2 388 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 FAM102AQ5T9C2 384 aaPredicted RBP6.8□□□□□ -1.32
SQLE-203ENST00000518931 METRNLQ641Q3 311 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 C16orf54Q6UWD8 224 aa6.8□□□□□ -1.32
SQLE-203ENST00000518931 SKAP1Q86WV1 359 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms