RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 UBE3BQ7Z3V4 1068 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 NACC2Q96BF6 587 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 CLPTM1LQ96KA5 538 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 FAM167AQ96KS9 214 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 AIFM3Q96NN9 605 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 AIFM2Q9BRQ8 373 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 PACSIN1Q9BY11 444 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 RHOBTB2Q9BYZ6 727 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 CDH19Q9H159 772 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 TBCCD1Q9NVR7 557 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 ASB6Q9NWX5 421 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 LRIT1Q9P2V4 623 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 USP25Q9UHP3 1055 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 ANKRD6Q9Y2G4 727 aa4.2□□□□□ -1.74
HERC4-215ENST00000515753 CDHR4A6H8M9 788 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 MARCH6O60337 910 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 ITGB6P18564 788 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 MALP21145 153 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 CYP2C19P33261 490 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 CACNA2D1P54289 1103 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 NHLH1Q02575 133 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 ATAT1Q5SQI0 421 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 SLC4A10Q6U841 1118 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 NOL8Q76FK4 1167 aaKnown RBP4.19□□□□□ -1.74
HERC4-215ENST00000515753 PDSS2Q86YH6 399 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 C3orf20Q8ND61 904 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 ACTRT2Q8TDY3 377 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 PTCD3Q96EY7 689 aaKnown RBP4.19□□□□□ -1.74
HERC4-215ENST00000515753 PNKPQ96T60 521 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 SLC12A5Q9H2X9 1139 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 NEU2Q9Y3R4 380 aa4.19□□□□□ -1.74
HERC4-215ENST00000515753 A0A1W2PS29 197 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 TCRBV7S2A1N4TA0A589 114 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 KIAA0391O15091 583 aaKnown RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 AKAP10O43572 662 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 ERN1O75460 977 aaKnown RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 IL33O95760 270 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 GPANK1O95872 356 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 FCER1AP12319 257 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 HK3P52790 923 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 ZNF280AP59817 542 aaPredicted RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 NOMO3P69849 1222 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 POU6F2P78424 691 aaPredicted RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 SRSF4Q08170 494 aaKnown RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 TCF15Q12870 199 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 NOGQ13253 232 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 PGS1Q32NB8 556 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 PLEKHG6Q3KR16 790 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 NOMO2Q5JPE7 1267 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 FAM90A1Q86YD7 464 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 SH2D3CQ8N5H7 860 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 Q8NA96 180 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 SCARB1Q8WTV0 552 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 RAB24Q969Q5 203 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 RGMAQ96B86 450 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 PDLIM2Q96JY6 352 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 RTFDC1Q9BY42 306 aaPredicted RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 GTPBP4Q9BZE4 634 aaKnown RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 GSTO2Q9H4Y5 243 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 WDCPQ9H6R7 721 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 GALNT9Q9HCQ5 603 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 AASDHPPTQ9NRN7 309 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 GNL3LQ9NVN8 582 aaKnown RBP4.18□□□□□ -1.74
HERC4-215ENST00000515753 NACADO15069 1562 aa4.18□□□□□ -1.74
HERC4-215ENST00000515753 F2RL2O00254 374 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 CHEK2O96017 543 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 SBK3P0C264 359 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 PF4V1P10720 104 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 VAV2P52735 878 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 SNAPC2Q13487 334 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 CYP2A13Q16696 494 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 FLYWCH1Q4VC44 716 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 KHDC1Q4VXA5 237 aaKnown RBP4.17□□□□□ -1.74
HERC4-215ENST00000515753 AKNAD1Q5T1N1 836 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 CCDC181Q5TID7 509 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 TMPRSS9Q7Z410 1059 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 SMG7Q92540 1137 aaKnown RBP4.17□□□□□ -1.74
HERC4-215ENST00000515753 SCAMP4Q969E2 229 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 HPS3Q969F9 1004 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 MVB12AQ96EY5 273 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 KLHL32Q96NJ5 620 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 POLR3GLQ9BT43 218 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 UNKLQ9H9P5 680 aaKnown RBP4.17□□□□□ -1.74
HERC4-215ENST00000515753 KMT5AQ9NQR1 393 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 HSFX1Q9UBD0 423 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 ZDHHC8Q9ULC8 765 aa4.17□□□□□ -1.74
HERC4-215ENST00000515753 THRAP3Q9Y2W1 955 aaKnown RBP4.17□□□□□ -1.74
HERC4-215ENST00000515753 MTO1Q9Y2Z2 717 aaKnown RBP4.17□□□□□ -1.74
HERC4-215ENST00000515753 CGB1A6NKQ9 187 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 E7ENX8 843 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 PRDX5P30044 214 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 ZNF81P51508 661 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 MAP2K6P52564 334 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 PROK1P58294 105 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 TAP2Q03519 686 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 ODR4Q5SWX8 454 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 EMC10Q5UCC4 262 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 CXorf57Q6NSI4 855 aaKnown RBP4.16□□□□□ -1.74
HERC4-215ENST00000515753 FOXR2Q6PJQ5 311 aa4.16□□□□□ -1.74
HERC4-215ENST00000515753 CATIPQ7Z7H3 387 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms