RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 MTO1Q9Y2Z2 717 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 STK24Q9Y6E0 443 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 IKBKGQ9Y6K9 419 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 DCCP43146 1447 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 RREB1Q92766 1687 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 UMODL1Q5DID0 1318 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 A6NJR5 290 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 HNRNPRO43390 633 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 MT-ND3P03897 115 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CYP1A1P04798 512 aaPredicted RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 ABHD2P08910 425 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 KRT10P13645 584 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 PSMC4P43686 418 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 ARL4CP56559 192 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 USP46P62068 366 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 UBXN2AP68543 259 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 RASA2Q15283 850 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 ACAD10Q6JQN1 1059 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 C1orf186Q6ZWK4 172 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 BRINP3Q76B58 766 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 MARK2Q7KZI7 788 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SDCCAG8Q86SQ7 713 aaPredicted RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 LCA5Q86VQ0 697 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SMC1BQ8NDV3 1235 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 ZNF398Q8TD17 642 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 PYROXD1Q8WU10 500 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 DHX38Q92620 1227 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 PTCD3Q96EY7 689 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CBWD1Q9BRT8 395 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 MIS12Q9H081 205 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 IQCGQ9H095 443 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 ETNK2Q9NVF9 386 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 DNAAF2Q9NVR5 837 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CLIC5Q9NZA1 410 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 NOCTQ9UK39 431 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CHMP2BQ9UQN3 213 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 ZNF142P52746 1687 aaPredicted RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CYP3A7-CYP3A51PA0A087WV96 503 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 A8MXQ7 604 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 C6orf229H3BNL8 230 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 LPXNO60711 386 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SLURP2P0DP57 97 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 KITP10721 976 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CYP3A7P24462 503 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SSTR1P30872 391 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SSTR3P32745 418 aaPredicted RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 CDK7P50613 346 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 MED21Q13503 144 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 EFTUD2Q15029 972 aaKnown RBP eCLIP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 RIPOR1Q6ZS17 1223 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SPATA24Q86W54 205 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 PALM2Q8IXS6 379 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 GLIS1Q8NBF1 620 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 HIPK4Q8NE63 616 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 PPP2R3CQ969Q6 453 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 MTBPQ96DY7 904 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 DDX27Q96GQ7 796 aaKnown RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 MPP4Q96JB8 637 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 RILPQ96NA2 401 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 POLR3CQ9BUI4 534 aaPredicted RBP6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 DMAC2Q9NW81 257 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 EURLQ9NYK6 297 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 COMMD3-BMI1R4GMX3 469 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 COL4A1P02462 1669 aa6.95□□□□□ -1.3
EXOSC9-212ENST00000513654 SPATA31A1Q5TZJ5 1347 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 FAM237BA0A1B0GVD1 139 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SGK1O00141 431 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 DDX39AO00148 427 aaKnown RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 DNALI1O14645 258 aaPredicted RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 MEIS2O14770 477 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 TBX3O15119 743 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 TYROBPO43914 113 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SETSIPP0DME0 302 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SNHG28P0DPA3 235 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 BGNP21810 368 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 TPP2P29144 1249 aaPredicted RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 GEMIN4P57678 1058 aaKnown RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 AP3B2Q13367 1082 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 TFDP1Q14186 410 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 DBN1Q16643 649 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 CLEC4GQ6UXB4 293 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 ISLR2Q6UXK2 745 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 ALYREFQ86V81 257 aaKnown RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 FAM71AQ8IYT1 594 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 OXNAD1Q96HP4 312 aaPredicted RBP6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 KREMEN1Q96MU8 473 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 FAM111AQ96PZ2 611 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 NMUR2Q9GZQ4 415 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SMYD3Q9H7B4 428 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SPECC1L-ADORA2AF8WAN1 911 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SLITRK3O94933 977 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 RXRBP28702 533 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 PHBP35232 272 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SLC1A1P43005 524 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 TCEAL1Q15170 157 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 SPDYAQ5MJ70 313 aa6.94□□□□□ -1.3
EXOSC9-212ENST00000513654 TPTE2Q6XPS3 522 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms