RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 CPB2Q96IY4 423 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ARFGEF2Q9Y6D5 1785 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 LYPLA2O95372 231 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 VDRP11473 427 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 WDR59Q6PJI9 974 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 PPM1NQ8N819 430 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 RIN2Q8WYP3 895 aaPredicted RBP13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 RSAD1Q9HA92 442 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 AFG3L2Q9Y4W6 797 aa13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 ASTN2O75129 1339 aaPredicted RBP13.8□□□□□ -0.2
PCDHA4-202ENST00000512229 TGFB1I1O43294 461 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ZNF606Q8WXB4 792 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 RBM15Q96T37 977 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 EPAS1Q99814 870 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 FAM118BQ9BPY3 351 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 KCND1Q9NSA2 647 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ATRNL1Q5VV63 1379 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 TADA2AO75478 443 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 GPD1P21695 349 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ORC1Q13415 861 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 RPS6KA2Q15349 733 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 BMT2Q1RMZ1 405 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 GOLGA7BQ2TAP0 167 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 P3H1Q32P28 736 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 BOLA3Q53S33 107 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ANO5Q75V66 913 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ABRAQ8N0Z2 381 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 C9orf72Q96LT7 481 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 TLR10Q9BXR5 811 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 LRRIQ3A6PVS8 624 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 B3GAT3O94766 335 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 GSTA1P08263 222 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 GSTA2P09210 222 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 H2AFXP16104 143 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 THPOP40225 353 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 PRKCIP41743 596 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ACVR2BQ13705 512 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 EPM2AIP1Q7L775 607 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ASB7Q9H672 318 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 METTL5Q9NRN9 209 aaKnown RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 KBTBD13C9JR72 458 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 NFKBIEO00221 500 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ADAMTS3O15072 1205 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 PJA2O43164 708 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 MCF2P10911 925 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 COILP38432 576 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 EFHC1Q5JVL4 640 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 NXNQ6DKJ4 435 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 IQSEC1Q6DN90 963 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ACOT1Q86TX2 421 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 NLGN2Q8NFZ4 835 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 COPS5Q92905 334 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 ZNF541Q9H0D2 1346 aa13.79□□□□□ -0.2
PCDHA4-202ENST00000512229 KCNN4O15554 427 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 GMNNO75496 209 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 GLRA2P23416 452 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 SERPINB6P35237 376 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 GRIK1P39086 918 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 DLG4P78352 724 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 MAPK7Q13164 816 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 STAT4Q14765 748 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 BEND6Q5SZJ8 279 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 TRMT10CQ7L0Y3 403 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 RYBPQ8N488 228 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 PITPNM3Q9BZ71 974 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 RAB6BQ9NRW1 208 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 HPCAL4Q9UM19 191 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 LRP6O75581 1613 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 COPEO14579 308 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 APOEP02649 317 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 APRTP07741 180 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 FNTAP49354 379 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 SULT1E1P49888 294 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 AMHR2Q16671 573 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 ELAC2Q9BQ52 826 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 FNDC3AQ9Y2H6 1198 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 PPP1R12AO14974 1030 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 SLC4A1P02730 911 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 LGALS2P05162 132 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 ATICP31939 592 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 MICAL1Q8TDZ2 1067 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 BAP1Q92560 729 aa13.78□□□□□ -0.2
PCDHA4-202ENST00000512229 TMEM134Q9H6X4 195 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms