RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 LAIR1Q6GTX8 287 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 DARS2Q6PI48 645 aaKnown RBP4.83□□□□□ -1.64
CAST-229ENST00000510098 MED25Q71SY5 747 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 MAEAQ7L5Y9 396 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 SMC5Q8IY18 1101 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 KIAA0319LQ8IZA0 1049 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 PLBD2Q8NHP8 589 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 C1orf43Q9BWL3 253 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 GSTO2Q9H4Y5 243 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 ARNT2Q9HBZ2 717 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 FBXO34Q9NWN3 711 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 SIDT1Q9NXL6 827 aaKnown RBP4.83□□□□□ -1.64
CAST-229ENST00000510098 BCCIPQ9P287 314 aaKnown RBP eCLIP4.83□□□□□ -1.64
CAST-229ENST00000510098 ATP11BQ9Y2G3 1177 aa4.83□□□□□ -1.64
CAST-229ENST00000510098 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 TMEM200CA6NKL6 621 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 FOXN1O15353 648 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 HRGP04196 525 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 NBPF7P0C2Y1 421 aaPredicted RBP4.82□□□□□ -1.64
CAST-229ENST00000510098 TRIM27P14373 513 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 GALEQ14376 348 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 CCDC93Q567U6 631 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 KHDC1LQ5JSQ8 128 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 RNF220Q5VTB9 566 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 AGAP9Q5VTM2 703 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 PCSK4Q6UW60 755 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 FITM2Q8N6M3 262 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 NT5C1BQ96P26 610 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 SARGQ9BW04 601 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 MRPL46Q9H2W6 279 aaKnown RBP4.82□□□□□ -1.64
CAST-229ENST00000510098 BRD9Q9H8M2 597 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 CYP4F11Q9HBI6 524 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 ANKFY1Q9P2R3 1169 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 PCDHA6Q9UN73 950 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 L1RE1Q9UN81 338 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 MAP3K2Q9Y2U5 619 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 FPGT-TNNI3KV9GXZ4 949 aa4.82□□□□□ -1.64
CAST-229ENST00000510098 GOLIM4O00461 696 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 MGEA5O60502 916 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 SLC43A1O75387 559 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 AHSGP02765 367 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 SLC6A2P23975 617 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 BMPR1AP36894 532 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 PHKA1P46020 1223 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 KCNJ5P48544 419 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 FSTL1Q12841 308 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 SAFBQ15424 915 aaKnown RBP eCLIP4.81□□□□□ -1.64
CAST-229ENST00000510098 SPDYE7PQ495Y7 208 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 UTP14CQ5TAP6 766 aaKnown RBP4.81□□□□□ -1.64
CAST-229ENST00000510098 TSHZ3Q63HK5 1081 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 ARMC6Q6NXE6 501 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 ZNF365Q70YC5 407 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 PPP1R3BQ86XI6 285 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 FAM90A1Q86YD7 464 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 RHOT2Q8IXI1 618 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 CPEB3Q8NE35 698 aaKnown RBP4.81□□□□□ -1.64
CAST-229ENST00000510098 OR56A1Q8NGH5 318 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 TBC1D15Q8TC07 691 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 LRTOMTQ8WZ04 291 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 ZMAT3Q9HA38 289 aaKnown RBP4.81□□□□□ -1.64
CAST-229ENST00000510098 FAM30AQ9NZY2 134 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 JKAMPQ9P055 326 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 CFAP97Q9P2B7 532 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 DKK2Q9UBU2 259 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 PCDHGB6Q9Y5F9 930 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
CAST-229ENST00000510098 PHGDHO43175 533 aaKnown RBP4.8□□□□□ -1.64
CAST-229ENST00000510098 RHOBTB3O94955 611 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 AGFG2O95081 481 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 MATN4O95460 622 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 GNAI2P04899 355 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 GJB1P08034 283 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 DDX6P26196 483 aaKnown RBP eCLIP4.8□□□□□ -1.64
CAST-229ENST00000510098 PEX2P28328 305 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 SLC6A4P31645 630 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 ZEB1P37275 1124 aaPredicted RBP4.8□□□□□ -1.64
CAST-229ENST00000510098 SOX8P57073 446 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 PSMC1P62191 440 aaKnown RBP4.8□□□□□ -1.64
CAST-229ENST00000510098 NOMO3P69849 1222 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 GUCY1B3Q02153 619 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 TAP1Q03518 808 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 EXOSC9Q06265 439 aaKnown RBP4.8□□□□□ -1.64
CAST-229ENST00000510098 MAP9Q49MG5 647 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 CRB2Q5IJ48 1285 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 SWSAP1Q6NVH7 229 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 COL23A1Q86Y22 540 aaPredicted RBP4.8□□□□□ -1.64
CAST-229ENST00000510098 ARHGEF19Q8IW93 802 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 FAM43AQ8N2R8 423 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 LCORLQ8N3X6 602 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 PCSK9Q8NBP7 692 aaKnown RBP4.8□□□□□ -1.64
CAST-229ENST00000510098 PJA1Q8NG27 643 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 AGAP2Q99490 1192 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 ADAM2Q99965 735 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 WDR11Q9BZH6 1224 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 BHMT2Q9H2M3 363 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 SERHL2Q9H4I8 314 aa4.8□□□□□ -1.64
CAST-229ENST00000510098 DDX21Q9NR30 783 aaKnown RBP eCLIP4.8□□□□□ -1.64
CAST-229ENST00000510098 KLHL11Q9NVR0 708 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms