RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 SPDYE4A6NLX3 237 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 MOSPD3O75425 235 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 SMC2O95347 1197 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 CYP3A5P20815 502 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 GARTP22102 1010 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 ELAVL2Q12926 359 aaKnown RBP9.37□□□□□ -0.91
SNCA-211ENST00000508895 TMEM132DQ14C87 1099 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 KNOP1Q1ED39 458 aaKnown RBP9.37□□□□□ -0.91
SNCA-211ENST00000508895 CTXN3Q4LDR2 81 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 ZNF658Q5TYW1 1059 aaPredicted RBP9.37□□□□□ -0.91
SNCA-211ENST00000508895 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 OSTM1Q86WC4 334 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 BRSK2Q8IWQ3 736 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 ZDHHC14Q8IZN3 488 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 HS6ST3Q8IZP7 471 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 TDRD5Q8NAT2 981 aaKnown RBP9.37□□□□□ -0.91
SNCA-211ENST00000508895 STKLD1Q8NE28 680 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 HDAC7Q8WUI4 952 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 ING5Q8WYH8 240 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 CCDC47Q96A33 483 aaKnown RBP9.37□□□□□ -0.91
SNCA-211ENST00000508895 NECTIN4Q96NY8 510 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 PGLYRP2Q96PD5 576 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 NUP62CLQ9H1M0 184 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 DNAJC25Q9H1X3 360 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 TMEM206Q9H813 350 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 AGPAT3Q9NRZ7 376 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 TMLHEQ9NVH6 421 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 RMND1Q9NWS8 449 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 ZDHHC7Q9NXF8 308 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 DPP3Q9NY33 737 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 CEP72Q9P209 647 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 STK39Q9UEW8 545 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 MAPK8IP1Q9UQF2 711 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 NUB1Q9Y5A7 615 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 NME7Q9Y5B8 376 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
SNCA-211ENST00000508895 ZFHX2Q9C0A1 2572 aaPredicted RBP9.36□□□□□ -0.91
SNCA-211ENST00000508895 PRR33A8MZF0 331 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 BIN1O00499 593 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 SYN3O14994 580 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 OAZ2O95190 189 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 MBD3O95983 291 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 ALADP13716 330 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 CD44P16070 742 aaKnown RBP9.36□□□□□ -0.91
SNCA-211ENST00000508895 GJA1P17302 382 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 NHLH1Q02575 133 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 MORC3Q14149 939 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 ZCWPW2Q504Y3 356 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 COBLL1Q53SF7 1204 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 PPM1LQ5SGD2 360 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 WSCD1Q658N2 575 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 SLFN12LQ6IEE8 588 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 ARMCX5Q6P1M9 558 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 PARM1Q6UWI2 310 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 RBM43Q6ZSC3 357 aaKnown RBP9.36□□□□□ -0.91
SNCA-211ENST00000508895 CCDC149Q6ZUS6 474 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 GET4Q7L5D6 327 aaPredicted RBP9.36□□□□□ -0.91
SNCA-211ENST00000508895 C12orf56Q8IXR9 622 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 GUF1Q8N442 669 aaKnown RBP9.36□□□□□ -0.91
SNCA-211ENST00000508895 RDH13Q8NBN7 331 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 BEST2Q8NFU1 509 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 ZNF461Q8TAF7 563 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 NOC3LQ8WTT2 800 aaKnown RBP9.36□□□□□ -0.91
SNCA-211ENST00000508895 ZNF516Q92618 1163 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 LPIN3Q9BQK8 851 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 RHOBTB2Q9BYZ6 727 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 PLA2G2FQ9BZM2 168 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 KCNK12Q9HB15 430 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 HSPBP1Q9NZL4 362 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
SNCA-211ENST00000508895 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 ANAPC1Q9H1A4 1944 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 CACNA1IQ9P0X4 2223 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 ARHGEF37A1IGU5 675 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
SNCA-211ENST00000508895 EXTL3O43909 919 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 C1RP00736 705 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 RHOP08100 348 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 COL4A2P08572 1712 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 ATF2P15336 505 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 NPR3P17342 541 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 CEBPBP17676 345 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 POLR2BP30876 1174 aaKnown RBP9.35□□□□□ -0.91
SNCA-211ENST00000508895 GBP2P32456 591 aaPredicted RBP9.35□□□□□ -0.91
SNCA-211ENST00000508895 PRCPP42785 496 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 CASP4P49662 377 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 GPR15P49685 360 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 CYP2J2P51589 502 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 HTR4Q13639 388 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 PRSS36Q5K4E3 855 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 ISM2Q6H9L7 571 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 DSTYKQ6XUX3 929 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
SNCA-211ENST00000508895 ATAD1Q8NBU5 361 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms