RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 RAB20Q9NX57 234 aa11.78□□□□□ -0.52
PROM1-207ENST00000508167 TADA2AO75478 443 aa11.78□□□□□ -0.52
PROM1-207ENST00000508167 KRT5P13647 590 aa11.78□□□□□ -0.52
PROM1-207ENST00000508167 TUBGCP4Q9UGJ1 667 aa11.78□□□□□ -0.52
PROM1-207ENST00000508167 C2CD2Q9Y426 696 aa11.78□□□□□ -0.52
PROM1-207ENST00000508167 FRMPD3Q5JV73 1810 aa11.78□□□□□ -0.52
PROM1-207ENST00000508167 BTNL10A8MVZ5 291 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 BAIAP3O94812 1187 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 ALDH2P05091 517 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 UCHL3P15374 230 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.52
PROM1-207ENST00000508167 GPNMBQ14956 572 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 GJB7Q6PEY0 223 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 CEP57Q86XR8 500 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 EFCAB13Q8IY85 973 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 MTUS1Q9ULD2 1270 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 SNX9Q9Y5X1 595 aa11.77□□□□□ -0.52
PROM1-207ENST00000508167 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.77□□□□□ -0.53
PROM1-207ENST00000508167 ANO9A1A5B4 782 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 POLR2FP61218 127 aaKnown RBP11.77□□□□□ -0.53
PROM1-207ENST00000508167 GRIK3Q13003 919 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 KIAA1841Q6NSI8 718 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 LINC01599Q8WXQ3 324 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 KCNN1Q92952 543 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 HPDLQ96IR7 371 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 ZNF560Q96MR9 790 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 UBE2TQ9NPD8 197 aaPredicted RBP11.77□□□□□ -0.53
PROM1-207ENST00000508167 CACNG4Q9UBN1 327 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 TET1Q8NFU7 2136 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 MYO9BQ13459 2157 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 CD58P19256 250 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 MYL6P60660 151 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 TUBB2AQ13885 445 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 COG1Q8WTW3 980 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 TUBB2BQ9BVA1 445 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 INTS2Q9H0H0 1204 aaKnown RBP11.77□□□□□ -0.53
PROM1-207ENST00000508167 ZNHIT6Q9NWK9 470 aaKnown RBP11.77□□□□□ -0.53
PROM1-207ENST00000508167 FAN1Q9Y2M0 1017 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 PCDHGC5Q9Y5F6 944 aa11.77□□□□□ -0.53
PROM1-207ENST00000508167 NT5C1B-RDH14C9J2C7 533 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 AFF1P51825 1210 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 WNT7BP56706 349 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 WDR93Q6P2C0 686 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 NT5DC4Q86YG4 428 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 LRRC57Q8N9N7 239 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 ZMAT2Q96NC0 199 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 SEPT11Q9NVA2 429 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 SNX12Q9UMY4 172 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 H0YGN5 161 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 MOCS3O95396 460 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 SERPING1P05155 500 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 PRLRP16471 622 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 GTF2H1P32780 548 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 VSNL1P62760 191 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 KRT83P78385 493 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 CBX1P83916 185 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 PTK2Q05397 1052 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 SGSM1Q2NKQ1 1148 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 DNAAF5Q86Y56 855 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 LRRC43Q8N309 656 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 TBC1D13Q9NVG8 400 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 CXXC1Q9P0U4 656 aaPredicted RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 HUS1O60921 280 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 TUSC3Q13454 348 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 SLC18A3Q16572 532 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 IQCEQ6IPM2 695 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 MRPL10Q7Z7H8 261 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 ELAC1Q9H777 363 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 MIOSQ9NXC5 875 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 ITGA11Q9UKX5 1188 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 PODXLO00592 558 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 MYBL2P10244 700 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 PBX3P40426 434 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 TAF6P49848 677 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 EPHB4P54760 987 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 NOP14P78316 857 aaKnown RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 FIBCD1Q8N539 461 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 LNX1Q8TBB1 728 aaPredicted RBP11.76□□□□□ -0.53
PROM1-207ENST00000508167 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 ARID3AQ99856 593 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 COLEC11Q9BWP8 271 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 DNAI2Q9GZS0 605 aa11.76□□□□□ -0.53
PROM1-207ENST00000508167 BCAR1P56945 870 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 TCTN1Q2MV58 587 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 ZACNQ401N2 412 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 CLLU1OSQ5K130 101 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 C1orf127Q8N9H9 656 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
PROM1-207ENST00000508167 CXCL16Q9H2A7 254 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 CNTN3Q9P232 1028 aa11.75□□□□□ -0.53
PROM1-207ENST00000508167 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms