RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 APAF1O14727 1248 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 VPS4BO75351 444 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 KIF20AO95235 890 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 CFIP05156 583 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 TRIM27P14373 513 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 PEX2P28328 305 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 RESTQ13127 1097 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 SEMA5AQ13591 1074 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 MAP9Q49MG5 647 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 Q8NA96 180 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 CPEB3Q8NE35 698 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 ZNF483Q8TF39 744 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 SMOQ99835 787 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 TINAGL1Q9GZM7 467 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 ARNT2Q9HBZ2 717 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 CPNE7Q9UBL6 633 aa5.05□□□□□ -1.6
TOPBP1-204ENST00000505804 M0QYG6 137 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MYO1FO00160 1098 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 POLRMTO00411 1230 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 TBX3O15119 743 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MGEA5O60502 916 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 ERN1O75460 977 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 DNAJB5O75953 348 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 UNC5CO95185 931 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MAP4K4O95819 1239 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 CHEK2O96017 543 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MYL1P05976 194 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MYF5P13349 255 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 LAG3P18627 525 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 ARFIP2P53365 341 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 TUBA3CQ13748 450 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 SAFBQ15424 915 aaKnown RBP eCLIP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 BEAN1Q3B7T3 259 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 LSM12Q3MHD2 195 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 SPDYE7PQ495Y7 208 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MIIPQ5JXC2 388 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 TUBA3EQ6PEY2 450 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 FAM46DQ8NEK8 389 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 PJA1Q8NG27 643 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 DDX17Q92841 729 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 NACC2Q96BF6 587 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 APIPQ96GX9 242 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MED15Q96RN5 788 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 TRIB1Q96RU8 372 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 TRIM54Q9BYV2 358 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 GPRC5BQ9NZH0 403 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 RNF181Q9P0P0 153 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 MED16Q9Y2X0 877 aa5.04□□□□□ -1.6
TOPBP1-204ENST00000505804 UNC119BA6NIH7 251 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 BTN3A1O00481 513 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 LPXNO60711 386 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 PQBP1O60828 265 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 ZFPL1O95159 310 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 ABHD16AO95870 558 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 HLA-DOAP06340 250 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 FDXRP22570 491 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 CXADRP78310 365 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 POU6F2P78424 691 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 PURAQ00577 322 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 PIGFQ07326 219 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 POLD3Q15054 466 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 TIGD2Q4W5G0 525 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 TAPT1Q6NXT6 567 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 CCDC146Q8IYE0 955 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 OR6B3Q8NGW1 331 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 FBXO41Q8TF61 875 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 KBTBD7Q8WVZ9 684 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 HAS1Q92839 578 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 RNF31Q96EP0 1072 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 MYEOVQ96EZ4 313 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 CNPPD1Q9BV87 410 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 ALOXE3Q9BYJ1 711 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 ZNF341Q9BYN7 854 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 LRRC27Q9C0I9 530 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 SIK2Q9H0K1 926 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 NRDE2Q9H7Z3 1164 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 KIAA1586Q9HCI6 787 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 SACM1LQ9NTJ5 587 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 CTTNBP2NLQ9P2B4 639 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 DKK2Q9UBU2 259 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 SRRDQ9UH36 339 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 FZD1Q9UP38 647 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 REXO2Q9Y3B8 237 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 NOX1Q9Y5S8 564 aa5.03□□□□□ -1.6
TOPBP1-204ENST00000505804 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 TMEM200CA6NKL6 621 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 MARCH11A6NNE9 402 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 FRS3O43559 492 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 TBC1D4O60343 1298 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 SUN1O94901 812 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 PEX11BO96011 259 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 GRPP07492 148 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 BRAFP15056 766 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 KCNA2P16389 499 aa5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 ZKSCAN1P17029 563 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 EN2P19622 333 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-204ENST00000505804 CHRM3P20309 590 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms