RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 FGD6Q6ZV73 1430 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 PRR23AA6NEV1 266 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 EVPLLA8MZ36 301 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 B8ZZF3 427 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CACNB4O00305 520 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 DNM1LO00429 736 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TRAF5O00463 557 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 BTN3A1O00481 513 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SCAMP2O15127 329 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CLOCKO15516 846 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 UBL4AP11441 157 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ABCG1P45844 678 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ACADVLP49748 655 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 LIG4P49917 911 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 NEK4P51957 841 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 NNTQ13423 1086 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 MADCAM1Q13477 382 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 KARSQ15046 597 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ARL13BQ3SXY8 428 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 FYB2Q5VWT5 728 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 METTL2BQ6P1Q9 378 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 C3orf67Q6ZVT6 689 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 DHX32Q7L7V1 743 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 FANK1Q8TC84 345 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 PTCD3Q96EY7 689 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SAMD11Q96NU1 681 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC106Q9BWC9 280 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RTFDC1Q9BY42 306 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 VIPAS39Q9H9C1 493 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CNOT7Q9UIV1 285 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RRN3P2A6NIE6 340 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF839A8K0R7 811 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CHL1O00533 1208 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RPS6KA5O75582 802 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 F8A1P23610 371 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ATP2B4P23634 1241 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 MZF1P28698 734 aaPredicted RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CD79BP40259 229 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CD97P48960 835 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF75DP51815 510 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 TKTL1P51854 596 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 AK2P54819 239 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SSRP1Q08945 709 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 CAMK2DQ13557 499 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 SWI5Q1ZZU3 235 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 FBXO48Q5FWF7 155 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF569Q5MCW4 686 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 ZMYM1Q5SVZ6 1142 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 KCNK18Q7Z418 384 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 METTL3Q86U44 580 aaKnown RBP6.54□□□□□ -1.36
CLCN3-204ENST00000504131 KCT2Q8NC54 265 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 MAGEC3Q8TD91 643 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 EPS8L1Q8TE68 723 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 FBXL21Q9UKT6 434 aa6.54□□□□□ -1.36
CLCN3-204ENST00000504131 PRRT4C9JH25 899 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ATP6V1G2-DDX39BF2Z307 99 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ICMTO60725 284 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PHF2O75151 1096 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 HSPD1P10809 573 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 VCLP18206 1134 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 FANCCQ00597 558 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SP140Q13342 867 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 BFSP2Q13515 415 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 LRIT3Q3SXY7 679 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 DRICH1Q6PGQ1 229 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CCBE1Q6UXH8 406 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 TAGAPQ8N103 731 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ATL1Q8WXF7 558 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 FBRSQ9HAH7 460 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ABCB6Q9NP58 842 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 VTA1Q9NP79 307 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 NEO1Q92859 1461 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 LMTK3Q96Q04 1460 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 C1orf232A0A0U1RR37 186 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 HFM1A2PYH4 1435 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 A8MV72 311 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PDPK1O15530 556 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PLCH2O75038 1416 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SRGAP2BP0DMP2 458 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 PSMA2P25787 234 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 RGS2P41220 211 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 GSSP48637 474 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 SNX17Q15036 470 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CCDC157Q569K6 752 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ABCC10Q5T3U5 1492 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 CDCA2Q69YH5 1023 aaPredicted RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 FRA10AC1Q70Z53 315 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF804AQ7Z570 1209 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 LRRTM3Q86VH5 581 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 GRPEL2Q8TAA5 225 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ZNF473Q8WTR7 871 aaKnown RBP6.53□□□□□ -1.36
CLCN3-204ENST00000504131 ANKS1AQ92625 1134 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 TAMM41Q96BW9 452 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 TRIM47Q96LD4 638 aa6.53□□□□□ -1.36
CLCN3-204ENST00000504131 RBM42Q9BTD8 480 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms