RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 TIGD2Q4W5G0 525 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 CRB2Q5IJ48 1285 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 RNF220Q5VTB9 566 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 FNDC7Q5VTL7 733 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 DARS2Q6PI48 645 aaKnown RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 USP37Q86T82 979 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 SYNE4Q8N205 404 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 FAM43AQ8N2R8 423 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 CPEB3Q8NE35 698 aaKnown RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 HAS1Q92839 578 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 DDX17Q92841 729 aaKnown RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 LENG9Q96B70 501 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 VSX1Q9NZR4 365 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 KCNE5Q9UJ90 142 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 AGAP1Q9UPQ3 857 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 REXO2Q9Y3B8 237 aaKnown RBP5.55□□□□□ -1.52
PTPRK-215ENST00000498284 NOX1Q9Y5S8 564 aa5.55□□□□□ -1.52
PTPRK-215ENST00000498284 PRC1O43663 620 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 PPFIA4O75335 1185 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 ERN1O75460 977 aaKnown RBP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 NPR1P16066 1061 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 TNFRSF1AP19438 455 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 DDX6P26196 483 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 FAM193AP78312 1265 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 POU6F2P78424 691 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 MXRA7P84157 204 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 HLTFQ14527 1009 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 ARMC6Q6NXE6 501 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 APOA5Q6Q788 366 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 NSUN7Q8NE18 718 aaKnown RBP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 IL31RAQ8NI17 732 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 RNF31Q96EP0 1072 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 BOD1Q96IK1 185 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 P2RX7Q99572 595 aaKnown RBP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 CNPPD1Q9BV87 410 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 ALOXE3Q9BYJ1 711 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 C22orf23Q9BZE7 217 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 SIK2Q9H0K1 926 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 BHMT2Q9H2M3 363 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 TPCN1Q9ULQ1 816 aa5.54□□□□□ -1.52
PTPRK-215ENST00000498284 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTPRK-215ENST00000498284 CCDC195A0A1B0GUA6 201 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 TMEM200CA6NKL6 621 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 NPIPB8E9PQR5 432 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 POLRMTO00411 1230 aaKnown RBP5.53□□□□□ -1.52
PTPRK-215ENST00000498284 GOLIM4O00461 696 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 FRS3O43559 492 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 KIF20AO95235 890 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 KCNA2P16389 499 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 ARFIP2P53365 341 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 TAPT1Q6NXT6 567 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 RHOUQ7L0Q8 258 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 Q8NA96 180 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
PTPRK-215ENST00000498284 KBTBD7Q8WVZ9 684 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 LRTOMTQ8WZ04 291 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 ANKS1AQ92625 1134 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 NACC2Q96BF6 587 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 LRIG1Q96JA1 1093 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 TRIB1Q96RU8 372 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 SMOQ99835 787 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 ADAM2Q99965 735 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 GALNT9Q9HCQ5 603 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 DDX21Q9NR30 783 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRK-215ENST00000498284 MRPS18AQ9NVS2 196 aaKnown RBP5.53□□□□□ -1.52
PTPRK-215ENST00000498284 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.53□□□□□ -1.52
PTPRK-215ENST00000498284 CTTNBP2NLQ9P2B4 639 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 MED16Q9Y2X0 877 aa5.53□□□□□ -1.52
PTPRK-215ENST00000498284 USP19O94966 1318 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CENPVL1A0A0U1RR11 272 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 MYADML2A6NDP7 307 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 UNC119BA6NIH7 251 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 M0QYG6 137 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 NARSO43776 548 aaKnown RBP5.52□□□□□ -1.53
PTPRK-215ENST00000498284 LPXNO60711 386 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CAND2O75155 1236 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 DNAJB5O75953 348 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CDKL5O76039 1030 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 ZFPL1O95159 310 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 UNC5CO95185 931 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 SLC7A1P30825 629 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 TBX4P57082 545 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 TCF15Q12870 199 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 SEMA5AQ13591 1074 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 POLD3Q15054 466 aaPredicted RBP5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CYP2A13Q16696 494 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 FAM160B1Q5W0V3 765 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CRIP3Q6Q6R5 217 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 DBX2Q6ZNG2 339 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CLNKQ7Z7G1 428 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 MRGPREQ86SM8 312 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 GGNQ86UU5 652 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 CCAR1Q8IX12 1150 aaKnown RBP5.52□□□□□ -1.53
PTPRK-215ENST00000498284 SARGQ9BW04 601 aa5.52□□□□□ -1.53
PTPRK-215ENST00000498284 TRIM54Q9BYV2 358 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms