RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ATAT1Q5SQI0 421 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 AGAP9Q5VTM2 703 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 TIGD7Q6NT04 549 aaPredicted RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 LILRA6Q6PI73 481 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 CYP26C1Q6V0L0 522 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 CTU1Q7Z7A3 348 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 REXO1L1PQ8IX06 675 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 SYT8Q8NBV8 401 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 DIS3LQ8TF46 1054 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 HPS3Q969F9 1004 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 KIAA1191Q96A73 305 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 EAF2Q96CJ1 260 aaPredicted RBP4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 CAPNS2Q96L46 248 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 TOX2Q96NM4 488 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 ACAP3Q96P50 834 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 KCNC2Q96PR1 638 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 MYLK2Q9H1R3 596 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 RTEL1Q9NZ71 1219 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 GPRC5BQ9NZH0 403 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 Q9UFV3 132 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 PRSS50Q9UI38 385 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 MAGEL2Q9UJ55 1249 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 FBXO10Q9UK96 956 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 INVSQ9Y283 1065 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 TMX2Q9Y320 296 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 MRFAP1Q9Y605 127 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 MYO18BQ8IUG5 2567 aa4.28□□□□□ -1.72
EXOSC3-208ENST00000496910 WDFY4Q6ZS81 3184 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 SPATA31A5Q5VU36 1347 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 SPATA31A7Q8IWB4 1347 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 QSER1Q2KHR3 1735 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 KLHL33A6NCF5 533 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 K7ENM7 598 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 B4GALT3O60512 393 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 TUSC2O75896 110 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 LPLP06858 475 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 GLULP15104 373 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 ABCB4P21439 1286 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 ADD2P35612 726 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 PPM1AP35813 382 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 STT3AP46977 705 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 PRIM2P49643 509 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 ADAM8P78325 824 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 TNFAIP2Q03169 654 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 PPFIA1Q13136 1202 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 CDC37Q16543 378 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 TBR1Q16650 682 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 KIAA0753Q2KHM9 967 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 RGL3Q3MIN7 710 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 RETSATQ6NUM9 610 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 CCDC62Q6P9F0 684 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 SPOCD1Q6ZMY3 1216 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 GAREM2Q75VX8 874 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 ZSCAN30Q86W11 494 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 KLHL36Q8N4N3 616 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 OR2C3Q8N628 320 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 MARCH10Q8NA82 808 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 ZSCAN18Q8TBC5 510 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 TGFBRAP1Q8WUH2 860 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 CFHR4Q92496 578 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 JADE3Q92613 823 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 TBC1D20Q96BZ9 403 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 UBXN10Q96LJ8 280 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 VPS11Q9H270 941 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 KCTD10Q9H3F6 313 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 RETREG1Q9H6L5 497 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 FAM204AQ9H8W3 233 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 L2HGDHQ9H9P8 463 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 GOLGA2P5Q9HBQ8 144 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 KMT5AQ9NQR1 393 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 SCOCQ9UIL1 159 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 CDC42EP3Q9UKI2 254 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 LRCH1Q9Y2L9 728 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 CRYL1Q9Y2S2 319 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 PTPN23Q9H3S7 1636 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 EEA1Q15075 1411 aa4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 CFAP65Q6ZU64 1925 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-208ENST00000496910 PHRF1Q9P1Y6 1649 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 GOLGA8AA7E2F4 631 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 GOLGA8BA8MQT2 603 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 MATN2O00339 956 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 TMEM127O75204 238 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 GFPT2O94808 682 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 PCDH8O95206 1070 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 APOL3O95236 402 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 CNOT4O95628 575 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 MAP2K2P36507 400 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 PIK3CBP42338 1070 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 STAT5BP51692 787 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 KCNQ1P51787 676 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 FAM193AP78312 1265 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 MRPS9P82933 396 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 SRSF2Q01130 221 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 HGFACQ04756 655 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 ACAP2Q15057 778 aa4.26□□□□□ -1.73
EXOSC3-208ENST00000496910 DGKDQ16760 1214 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms