RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ZNF165P49910 485 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 MARSP56192 900 aaKnown RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 YWHAHQ04917 246 aaPredicted RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 CAMK1Q14012 370 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 KCNJ12Q14500 433 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 HSP90AA4PQ58FG1 418 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 TCEAL5Q5H9L2 206 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 ZNF667Q5HYK9 610 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 RTP2Q5QGT7 225 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 OVOS1Q6IE37 1185 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 ZNF280DQ6N043 979 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 PRSS55Q6UWB4 352 aaPredicted RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 CD300LGQ6UXG3 332 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 RBM23Q86U06 439 aaKnown RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 TRIM59Q8IWR1 403 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 GPR65Q8IYL9 337 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 RNF168Q8IYW5 571 aaPredicted RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
PRPF3-207ENST00000496202 FBXL13Q8NEE6 735 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 PPM1EQ8WY54 764 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 TAF4BQ92750 862 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 SLC35C1Q96A29 364 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 MED15Q96RN5 788 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 MMS19Q96T76 1030 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 CHST7Q9NS84 486 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 SNX9Q9Y5X1 595 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 TSC2P49815 1807 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 SZT2Q5T011 3432 aa10.39□□□□□ -0.75
PRPF3-207ENST00000496202 SMTNL1A8MU46 457 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 HIDE1A8MVS5 230 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 NCK2O43639 380 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 CAVIN2O95810 425 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 EFEMP2O95967 443 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 RPL17P18621 184 aaKnown RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 EEF1GP26641 437 aaKnown RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 FMO5P49326 533 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 NDUFV1P49821 464 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 TPM4P67936 248 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 CCDC85BQ15834 202 aaPredicted RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 MAN2A1Q16706 1144 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 SGSM1Q2NKQ1 1148 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 WDR72Q3MJ13 1102 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 CTXN3Q4LDR2 81 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 WDR44Q5JSH3 913 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 KIAA0319Q5VV43 1072 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 ELMSAN1Q6PJG2 1045 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 SCARA5Q6ZMJ2 495 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 EP400NLQ6ZTU2 488 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 ADGRD2Q7Z7M1 963 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 PPFIBP1Q86W92 1011 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 ADGRF2Q8IZF7 708 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 THEM5Q8N1Q8 247 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 TMEM86AQ8N2M4 240 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 TOP6BLQ8N6T0 577 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 CXorf38Q8TB03 319 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 TAS1R2Q8TE23 839 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 CDCA3Q99618 268 aaPredicted RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 BPIFA3Q9BQP9 254 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 IGFLR1Q9H665 355 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 GDAP2Q9NXN4 497 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 FNIP2Q9P278 1114 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 NXF1Q9UBU9 619 aaKnown RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 TIMM13Q9Y5L4 95 aaPredicted RBP10.38□□□□□ -0.75
PRPF3-207ENST00000496202 IRAK3Q9Y616 596 aa10.38□□□□□ -0.75
PRPF3-207ENST00000496202 CDH23Q9H251 3354 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 OR6C75A6NL08 312 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 PER2O15055 1255 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 P4HA2O15460 535 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 TEX28O15482 410 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 VNN1O95497 513 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 STAU1O95793 577 aaKnown RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 GLUD1P00367 558 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 ASS1P00966 412 aaKnown RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CST3P01034 146 aaPredicted RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CYP11A1P05108 521 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CNPP09543 421 aaKnown RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CPB1P15086 417 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CDK11BP21127 795 aaKnown RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 ARPP19P56211 112 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 NOP14P78316 857 aaKnown RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 KCNH2Q12809 1159 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 DUSP6Q16828 381 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CBWD6Q4V339 395 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CBWD3Q5JTY5 395 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 CBWD5Q5RIA9 395 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 WSCD1Q658N2 575 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 C15orf39Q6ZRI6 1047 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 SPATA18Q8TC71 538 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 KLHL5Q96PQ7 755 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 ARID3AQ99856 593 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
PRPF3-207ENST00000496202 OXCT2Q9BYC2 517 aaPredicted RBP10.37□□□□□ -0.75
PRPF3-207ENST00000496202 NIF3L1Q9GZT8 377 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms