RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 ZNF785A8K8V0 405 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 FRS3O43559 492 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 ANXA1P04083 346 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 IFIT2P09913 472 aaKnown RBP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 RARBP10826 455 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 MYF5P13349 255 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 BRAFP15056 766 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 NHLH2Q02577 135 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 HABP2Q14520 560 aaPredicted RBP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 KIF22Q14807 665 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 EMC10Q5UCC4 262 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 TMPRSS6Q8IU80 811 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 SYT12Q8IV01 421 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 SLC17A8Q8NDX2 589 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 FBXO41Q8TF61 875 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 ANKS1AQ92625 1134 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 ZG16BQ96DA0 208 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 APIPQ96GX9 242 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 IMPG2Q9BZV3 1241 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 IKZF4Q9H2S9 585 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF287Q9HBT7 754 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 KIAA1586Q9HCI6 787 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 PARPBPQ9NWS1 579 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 OGDHLQ9ULD0 1010 aa3.42□□□□□ -1.86
LRIF1-203ENST00000494675 REXO2Q9Y3B8 237 aaKnown RBP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.42□□□□□ -1.86
LRIF1-203ENST00000494675 PRSS29PA6NIE9 313 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 ISM1B1AKI9 464 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 LEFTY2O00292 366 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 PEX14O75381 377 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 RECQL4O94761 1208 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 MYL3P08590 195 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 CKBP12277 381 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 NPR1P16066 1061 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 APOBEC3AP31941 199 aaPredicted RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 SCNN1GP51170 649 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 RRP1BQ14684 758 aaKnown RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 C1QL3Q5VWW1 255 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 TSHZ3Q63HK5 1081 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 NAIF1Q69YI7 327 aaPredicted RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 DNAJC10Q8IXB1 793 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 OR6B3Q8NGW1 331 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 IL17DQ8TAD2 202 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 PARD3BQ8TEW8 1205 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 CACTINQ8WUQ7 758 aaKnown RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 SCAMP4Q969E2 229 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 SUCLG2Q96I99 432 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 MRGPRX1Q96LB2 322 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 MPHOSPH6Q99547 160 aaKnown RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 P2RX7Q99572 595 aaKnown RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 SIK2Q9H0K1 926 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF703Q9H7S9 590 aaPredicted RBP3.41□□□□□ -1.86
LRIF1-203ENST00000494675 CHST12Q9NRB3 414 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 ATP11BQ9Y2G3 1177 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 SNX13Q9Y5W8 968 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 USP19O94966 1318 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 XDHP47989 1333 aa3.41□□□□□ -1.86
LRIF1-203ENST00000494675 KLRG2A4D1S0 409 aaPredicted RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 RHPN2P1A8MT19 583 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 PRSS23O95084 383 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 SCAF4O95104 1147 aaKnown RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 PEX11BO96011 259 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 ZKSCAN1P17029 563 aaPredicted RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF135P52742 658 aaPredicted RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 SUMO3P55854 103 aaPredicted RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 MXRA7P84157 204 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 IFIT5Q13325 482 aaKnown RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 BIRC2Q13490 618 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 CNGA2Q16280 664 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 NOMO2Q5JPE7 1267 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 FAM102AQ5T9C2 384 aaPredicted RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF783Q6ZMS7 281 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 KRT78Q8N1N4 520 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 TMIEQ8NEW7 156 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 NUP133Q8WUM0 1156 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 KBTBD7Q8WVZ9 684 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 DDX17Q92841 729 aaKnown RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 TNIP3Q96KP6 325 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 DCLRE1CQ96SD1 692 aaKnown RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 NAA15Q9BXJ9 866 aaKnown RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 ZNF700Q9H0M5 742 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 MMRN2Q9H8L6 949 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 CPNE7Q9UBL6 633 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 SORCS3Q9UPU3 1222 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 MED16Q9Y2X0 877 aa3.4□□□□□ -1.86
LRIF1-203ENST00000494675 USP15Q9Y4E8 981 aaPredicted RBP3.4□□□□□ -1.86
LRIF1-203ENST00000494675 MYO1CO00159 1063 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 MYO1FO00160 1098 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 BTN3A1O00481 513 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 TBX3O15119 743 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 TBC1D4O60343 1298 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 CHEK2O96017 543 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 SLC5A1P13866 664 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 RPL17P18621 184 aaKnown RBP3.4□□□□□ -1.87
LRIF1-203ENST00000494675 AK2P54819 239 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 RHBDL3P58872 404 aa3.4□□□□□ -1.87
LRIF1-203ENST00000494675 RNASE9P60153 205 aaKnown RBP3.4□□□□□ -1.87
LRIF1-203ENST00000494675 OS9Q13438 667 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms