RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 A0A087X1B8 175 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 CCDC195A0A1B0GUA6 201 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 GRID2IPA4D2P6 1211 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 E9PLN8 166 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 TOR1BO14657 336 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 PRPF3O43395 683 aaKnown RBP6.93□□□□□ -1.3
SSB-212ENST00000494051 MATN4O95460 622 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 MYBP10242 640 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 KCNA2P16389 499 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 VAV2P52735 878 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 NKX6-1P78426 367 aaPredicted RBP6.93□□□□□ -1.3
SSB-212ENST00000494051 TAP1Q03518 808 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 FPGSQ05932 587 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 SCAPQ12770 1279 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 KIF22Q14807 665 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 FAM102BQ5T8I3 360 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 CXorf57Q6NSI4 855 aaKnown RBP6.93□□□□□ -1.3
SSB-212ENST00000494051 TAPT1Q6NXT6 567 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 B3GNT9Q6UX72 402 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 Q6YL49 198 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 BEND2Q8NDZ0 799 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 PPP1R35Q8TAP8 253 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 TRIB1Q96RU8 372 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 SMOQ99835 787 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 VKORC1Q9BQB6 163 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 CASS4Q9NQ75 786 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 CTTNBP2NLQ9P2B4 639 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 ZDHHC8Q9ULC8 765 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 WDR33Q9C0J8 1336 aaKnown RBP6.93□□□□□ -1.3
SSB-212ENST00000494051 COL4A3Q01955 1670 aa6.93□□□□□ -1.3
SSB-212ENST00000494051 TRGV11A0A075B6L2 103 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 PRAMEF33A0A0G2JMD5 474 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 H3BML4 177 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 POLRMTO00411 1230 aaKnown RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 PRAMEF10O60809 474 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 GCP02774 474 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 GNAI2P04899 355 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 U2AF1L5P0DN76 240 aaPredicted RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 HKR1P10072 659 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 FDXRP22570 491 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 HTR1BP28222 390 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 IL12RB1P42701 662 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 AVPR1BP47901 424 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 U2AF1Q01081 240 aaKnown RBP eCLIP6.92□□□□□ -1.3
SSB-212ENST00000494051 EXOSC9Q06265 439 aaKnown RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 CD300EQ496F6 205 aaPredicted RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 PREPLQ4J6C6 727 aaPredicted RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 HECTD2Q5U5R9 776 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 SLC44A3Q8N4M1 653 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 PCSK9Q8NBP7 692 aaKnown RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 ZBTB34Q8NCN2 500 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 PLBD2Q8NHP8 589 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 BRIX1Q8TDN6 353 aaKnown RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 Q96MF0 132 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 SARS2Q9NP81 518 aaKnown RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.92□□□□□ -1.3
SSB-212ENST00000494051 CPA4Q9UI42 421 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 PCDHA6Q9UN73 950 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 NEU2Q9Y3R4 380 aa6.92□□□□□ -1.3
SSB-212ENST00000494051 A0A1W2PS29 197 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 CTNND1O60716 968 aaKnown RBP6.91□□□□□ -1.3
SSB-212ENST00000494051 VPS4BO75351 444 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 UBXN7O94888 489 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 SUN1O94901 812 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 RPS7P62081 194 aaKnown RBP6.91□□□□□ -1.3
SSB-212ENST00000494051 POU6F2P78424 691 aaPredicted RBP6.91□□□□□ -1.3
SSB-212ENST00000494051 BLOC1S1P78537 153 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 MC2RQ01718 297 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 HABP2Q14520 560 aaPredicted RBP6.91□□□□□ -1.3
SSB-212ENST00000494051 CRB2Q5IJ48 1285 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 KHDC1LQ5JSQ8 128 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 DAAM2Q86T65 1068 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 LRIG1Q96JA1 1093 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 GPR35Q9HC97 309 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 SYBUQ9NX95 663 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 STAP2Q9UGK3 403 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 PACSIN3Q9UKS6 424 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 AGAP1Q9UPQ3 857 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 DMRT1Q9Y5R6 373 aa6.91□□□□□ -1.3
SSB-212ENST00000494051 TSPAN6O43657 245 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 KIF20AO95235 890 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 CHEK2O96017 543 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 HDCP19113 662 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 ANXA11P50995 505 aaKnown RBP6.9□□□□□ -1.3
SSB-212ENST00000494051 DYRK1AQ13627 763 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 MINDY4Q4G0A6 757 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 SP5Q6BEB4 398 aaPredicted RBP6.9□□□□□ -1.3
SSB-212ENST00000494051 USP37Q86T82 979 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 CELF5Q8N6W0 485 aaKnown RBP6.9□□□□□ -1.3
SSB-212ENST00000494051 FUBP1Q96AE4 644 aaKnown RBP6.9□□□□□ -1.3
SSB-212ENST00000494051 LRFN3Q9BTN0 628 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 CNPPD1Q9BV87 410 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 TINAGL1Q9GZM7 467 aaPredicted RBP6.9□□□□□ -1.3
SSB-212ENST00000494051 SIK2Q9H0K1 926 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 RSAD1Q9HA92 442 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 MRPS18AQ9NVS2 196 aaKnown RBP6.9□□□□□ -1.3
SSB-212ENST00000494051 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 GABBR1Q9UBS5 961 aa6.9□□□□□ -1.3
SSB-212ENST00000494051 EPN1Q9Y6I3 576 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms