RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MMEP08473 750 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 CLTBP09497 229 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 GNA15P30679 374 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 AFF1P51825 1210 aaKnown RBP23.14■■□□□ 1.29
SMC4-221ENST00000489573 CDH8P55286 799 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 CCL23P55773 120 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 LRRC26Q2I0M4 334 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 NECAB2Q7Z6G3 386 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 TTC39CQ8N584 583 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 MMS19Q96T76 1030 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 TMEM39AQ9NV64 488 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 TRIM10Q9UDY6 481 aa23.14■■□□□ 1.29
SMC4-221ENST00000489573 ABL1P00519 1130 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 CALCAP01258 141 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 CXCL10P02778 98 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 CYP2C18P33260 490 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 TAF6P49848 677 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 GRIK3Q13003 919 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 GUCA1BQ9UMX6 200 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 SNX9Q9Y5X1 595 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 BRCA2P51587 3418 aa23.13■■□□□ 1.29
SMC4-221ENST00000489573 INPPL1O15357 1258 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 KIF5CO60282 957 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 ETF1P62495 437 aaKnown RBP23.12■■□□□ 1.29
SMC4-221ENST00000489573 SV2CQ496J9 727 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 PALB2Q86YC2 1186 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 PCDHB18PQ96TA0 734 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 PACSIN1Q9BY11 444 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 INPP5FQ9Y2H2 1132 aa23.12■■□□□ 1.29
SMC4-221ENST00000489573 CILPO75339 1184 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 H2AFZP0C0S5 128 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 INCA1Q0VD86 236 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 ZNF394Q53GI3 561 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 GLB1LQ6UWU2 654 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 H2AFVQ71UI9 128 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 ELAC1Q9H777 363 aaKnown RBP23.11■■□□□ 1.29
SMC4-221ENST00000489573 TMEM161AQ9NX61 479 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 INTUQ9ULD6 942 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 DNAH12Q6ZR08 3092 aa23.11■■□□□ 1.29
SMC4-221ENST00000489573 KPNA7A9QM74 516 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 ENPP3O14638 875 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 THAP12O43422 761 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 POMCP01189 267 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 GNG11P61952 73 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 GDAP2Q9NXN4 497 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 MYO1AQ9UBC5 1043 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 PUF60Q9UHX1 559 aaKnown RBP23.1■■□□□ 1.29
SMC4-221ENST00000489573 BARX2Q9UMQ3 279 aaPredicted RBP23.1■■□□□ 1.29
SMC4-221ENST00000489573 SCN1AP35498 2009 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 TMCO5BA8MYB1 307 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 SPTLC1O15269 473 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 PAEPP09466 180 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 GZMAP12544 262 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 RPL9P32969 192 aaKnown RBP23.1■■□□□ 1.29
SMC4-221ENST00000489573 TCTN1Q2MV58 587 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 WHAMMQ8TF30 809 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 IRX2Q9BZI1 471 aaPredicted RBP23.1■■□□□ 1.29
SMC4-221ENST00000489573 TAS2R14Q9NYV8 317 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 DUSP10Q9Y6W6 482 aa23.1■■□□□ 1.29
SMC4-221ENST00000489573 PODXLO00592 558 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 RAD23BP54727 409 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 LILRA4P59901 499 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 TUSC3Q13454 348 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 CLLU1OSQ5K130 101 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 SYT10Q6XYQ8 523 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 TRIM72Q6ZMU5 477 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 ELOVL4Q9GZR5 314 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 ISCUQ9H1K1 167 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 PDCL3Q9H2J4 239 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 HMGXB4Q9UGU5 601 aa23.09■■□□□ 1.29
SMC4-221ENST00000489573 MACROD2A1Z1Q3 448 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 CASTOR2A6NHX0 329 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 RTN2O75298 545 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 RFC2P35250 354 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 NDST1P52848 882 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 GALCP54803 685 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 CLEC16AQ2KHT3 1053 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 DEFB128Q7Z7B8 93 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 DNAAF5Q86Y56 855 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 URGCPQ8TCY9 931 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 ZNF606Q8WXB4 792 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 SECISBP2LQ93073 1101 aaKnown RBP23.08■■□□□ 1.29
SMC4-221ENST00000489573 DDX27Q96GQ7 796 aaKnown RBP23.08■■□□□ 1.29
SMC4-221ENST00000489573 TMEM176AQ96HP8 235 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 TWNKQ96RR1 684 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 MRPL45Q9BRJ2 306 aaKnown RBP23.08■■□□□ 1.29
SMC4-221ENST00000489573 CACNG4Q9UBN1 327 aa23.08■■□□□ 1.29
SMC4-221ENST00000489573 SCN5AQ14524 2016 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 BTNL10A8MVZ5 291 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 TMEM253P0C7T8 217 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 BRD2P25440 801 aaKnown RBP23.07■■□□□ 1.28
SMC4-221ENST00000489573 CLCNKBP51801 687 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 SOWAHAQ2M3V2 549 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 NOMO2Q5JPE7 1267 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 ZNF569Q5MCW4 686 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 SLC4A11Q8NBS3 891 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 ZNF592Q92610 1267 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 UROC1Q96N76 676 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 DNAI1Q9UI46 699 aa23.07■■□□□ 1.28
SMC4-221ENST00000489573 PAXBP1Q9Y5B6 917 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms