RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 ODC1P11926 461 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 CYP3A5P20815 502 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 LRPAP1P30533 357 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 TOB1P50616 345 aaPredicted RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 SATB1Q01826 763 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 SIM2Q14190 667 aaPredicted RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 OVOS1Q6IE37 1185 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 CEP68Q76N32 757 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 ITIH5Q86UX2 942 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 SPEM1Q8N4L4 309 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 BEST2Q8NFU1 509 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 PLIN2Q99541 437 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 NTPCRQ9BSD7 190 aaKnown RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 ATXN3LQ9H3M9 355 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 RPF1Q9H9Y2 349 aaKnown RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 KCND2Q9NZV8 630 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 ASB3Q9Y575 518 aa11.29□□□□□ -0.6
CHKB-211ENST00000489453 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
CHKB-211ENST00000489453 OBSL1O75147 1896 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 K7ENM7 598 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 MEFVO15553 781 aaPredicted RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 LRP3O75074 770 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 FAM13AO94988 1023 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 KRT18P05783 430 aaKnown RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 CHRNB1P11230 501 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 TDGF1P13385 188 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 KCNA4P22459 653 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 SOX9P48436 509 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 FNTBP49356 437 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 MLLT6P55198 1093 aaPredicted RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 CACNB1Q02641 598 aaPredicted RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 GPR17Q13304 367 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 MYBPC2Q14324 1141 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 VEPH1Q14D04 833 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 TAF12Q16514 161 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 IL17AQ16552 155 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 ARHGAP29Q52LW3 1261 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 RILPL1Q5EBL4 403 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 DGKKQ5KSL6 1271 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 GPR158Q5T848 1215 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 HEATR6Q6AI08 1181 aaKnown RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 TMC8Q8IU68 726 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 ZNF687Q8N1G0 1237 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 NETO1Q8TDF5 533 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 TSPAN18Q96SJ8 248 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 MMTAG2Q9BU76 263 aaKnown RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 PARD6AQ9NPB6 346 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
CHKB-211ENST00000489453 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
CHKB-211ENST00000489453 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 NPHP3-ACAD11A0A0J9YXS1 232 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.27□□□□□ -0.61
CHKB-211ENST00000489453 TTC26A0AVF1 554 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 MTMR11A4FU01 709 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 LACTBL1A8MY62 500 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 SPECC1L-ADORA2AF8WAN1 911 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 H3BQV1 296 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 OGTO15294 1046 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 TYMPP19971 482 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 PAX3P23760 479 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 GABRR2P28476 465 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 CNR2P34972 360 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 TNFSF9P41273 254 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 SLC12A3P55017 1021 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 NCKAP1LP55160 1127 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
CHKB-211ENST00000489453 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 FCHO2Q0JRZ9 810 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 STXBP5Q5T5C0 1151 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 CENPPQ6IPU0 288 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 DNAJB7Q7Z6W7 309 aaPredicted RBP11.27□□□□□ -0.61
CHKB-211ENST00000489453 LONP2Q86WA8 852 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 GPBP1Q86WP2 473 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 RALGPS2Q86X27 583 aaPredicted RBP11.27□□□□□ -0.61
CHKB-211ENST00000489453 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 ARID3BQ8IVW6 561 aaPredicted RBP11.27□□□□□ -0.61
CHKB-211ENST00000489453 TMEM130Q8N3G9 435 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 MYCT1Q8N699 235 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 CALML4Q96GE6 196 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 PNMA5Q96PV4 448 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 MSTO1Q9BUK6 570 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 DNAJC25Q9H1X3 360 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 ZHX3Q9H4I2 956 aa11.27□□□□□ -0.61
CHKB-211ENST00000489453 RBM12Q9NTZ6 932 aaKnown RBP11.27□□□□□ -0.61
CHKB-211ENST00000489453 THG1LQ9NWX6 298 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms