RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 SLC20A1Q8WUM9 679 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 DDX1Q92499 740 aaKnown RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 ARHGEF26Q96DR7 871 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 ANKRD36BP1Q96IX9 119 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 POP1Q99575 1024 aaKnown RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 NUP85Q9BW27 656 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 DNAI2Q9GZS0 605 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 NIF3L1Q9GZT8 377 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 TSPYL1Q9H0U9 437 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 FZD8Q9H461 694 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 SUGCTQ9HAC7 445 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 TXNRD2Q9NNW7 524 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 OSGEPQ9NPF4 335 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 TOPORSQ9NS56 1045 aaPredicted RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 HOMER3Q9NSC5 361 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 CNOT8Q9UFF9 292 aaKnown RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 DMGDHQ9UI17 866 aaKnown RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 CPSF3Q9UKF6 684 aaKnown RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 PACSIN2Q9UNF0 486 aaPredicted RBP7.07□□□□□ -1.28
HDLBP-243ENST00000488923 PCDHB4Q9Y5E5 795 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 PCDHA3Q9Y5H8 950 aa7.07□□□□□ -1.28
HDLBP-243ENST00000488923 OTOFQ9HC10 1997 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 PTPRFP10586 1907 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 CCL15-CCL14A0A0B4J2E2 113 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 MYO1FO00160 1098 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 NDC80O14777 642 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 POLR3GO15318 223 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 THAP12O43422 761 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 RAD51CO43502 376 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 MED7O43513 233 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 SORBS3O60504 671 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 PHF2O75151 1096 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ARIH2O95376 493 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ZIC2O95409 532 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 CYP1A1P04798 512 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 CALB1P05937 261 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 UNGP13051 313 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 PROZP22891 400 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 MARK3P27448 753 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ADORA2AP29274 412 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 GNA15P30679 374 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 POLR2BP30876 1174 aaKnown RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ATICP31939 592 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 FNTAP49354 379 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 DNA2P51530 1060 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 SLC7A5Q01650 507 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 GUCY2DQ02846 1103 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ARHGAP1Q07960 439 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 FSTL1Q12841 308 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 HLTFQ14527 1009 aaKnown RBP eCLIP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 MESDQ14696 234 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 CCL15Q16663 113 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 FAM110CQ1W6H9 321 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ZNF568Q3ZCX4 644 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 TAF3Q5VWG9 929 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 IQSEC1Q6DN90 963 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 EFCAB12Q6NXP0 572 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 LRIG3Q6UXM1 1119 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 CEP128Q6ZU80 1094 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ZNF771Q7L3S4 317 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ZNF410Q86VK4 478 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 PHF13Q86YI8 300 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 FBXO16Q8IX29 292 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 KLHL7Q8IXQ5 586 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 MCOLN2Q8IZK6 566 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 RBBP8NLQ8NC74 664 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 TMEM35BQ8NCS4 154 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ZSWIM2Q8NEG5 633 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 SEC14L1Q92503 715 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 KAT5Q92993 513 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ITPKCQ96DU7 683 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 TSPAN18Q96SJ8 248 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 PCDHB18PQ96TA0 734 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ADPGKQ9BRR6 497 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 TRAIPQ9BWF2 469 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 MIS12Q9H081 205 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ABHD16BQ9H3Z7 469 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 ASB7Q9H672 318 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 RPF1Q9H9Y2 349 aaKnown RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 GPBP1L1Q9HC44 474 aaPredicted RBP7.06□□□□□ -1.28
HDLBP-243ENST00000488923 PARVAQ9NVD7 372 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 TAS2R14Q9NYV8 317 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 STRIP2Q9ULQ0 834 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 COG5Q9UP83 839 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 SCN4AP35499 1836 aa7.06□□□□□ -1.28
HDLBP-243ENST00000488923 GOLGA6L10A6NI86 522 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 SLC15A5A6NIM6 579 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 ZBTB42B2RXF5 422 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 INO80B-WBP1J3KQ70 363 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 PSTPIP1O43586 416 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 VNN1O95497 513 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 C22orf31O95567 290 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 STAU1O95793 577 aaKnown RBP7.05□□□□□ -1.28
HDLBP-243ENST00000488923 LGALS2P05162 132 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 GLI1P08151 1106 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 PAEPP09466 180 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 BMP2P12643 396 aa7.05□□□□□ -1.28
HDLBP-243ENST00000488923 ACO1P21399 889 aaKnown RBP7.05□□□□□ -1.28
HDLBP-243ENST00000488923 COMTP21964 271 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms