RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 CFAP52Q8N1V2 620 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 Q8NA96 180 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 DDX17Q92841 729 aaKnown RBP6.69□□□□□ -1.34
USP48-209ENST00000487880 MYEOVQ96EZ4 313 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 MED15Q96RN5 788 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 ARNT2Q9HBZ2 717 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 CNNM1Q9NRU3 951 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.69□□□□□ -1.34
USP48-209ENST00000487880 AGAP1Q9UPQ3 857 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 CDYLQ9Y232 598 aa6.69□□□□□ -1.34
USP48-209ENST00000487880 GNAI2P04899 355 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 PEX2P28328 305 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 BMPR1AP36894 532 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 TMPRSS9Q7Z410 1059 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 KRT78Q8N1N4 520 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 TMEM132CQ8N3T6 1108 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 LENG9Q96B70 501 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
USP48-209ENST00000487880 ADAM2Q99965 735 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 MRPS18AQ9NVS2 196 aaKnown RBP6.68□□□□□ -1.34
USP48-209ENST00000487880 GPRC5BQ9NZH0 403 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 CTTNBP2NLQ9P2B4 639 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 MYRFQ9Y2G1 1151 aa6.68□□□□□ -1.34
USP48-209ENST00000487880 TMEM200CA6NKL6 621 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 TBX3O15119 743 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 GPANK1O95872 356 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
USP48-209ENST00000487880 KITP10721 976 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 PIM1P11309 404 aaPredicted RBP6.67□□□□□ -1.34
USP48-209ENST00000487880 MYF5P13349 255 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 FDXRP22570 491 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 CXADRP78310 365 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 PIGFQ07326 219 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 TUBA3CQ13748 450 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 FNDC7Q5VTL7 733 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 ARMC6Q6NXE6 501 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 TUBA3EQ6PEY2 450 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 NOL8Q76FK4 1167 aaKnown RBP6.67□□□□□ -1.34
USP48-209ENST00000487880 USP37Q86T82 979 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 FUBP1Q96AE4 644 aaKnown RBP6.67□□□□□ -1.34
USP48-209ENST00000487880 APIPQ96GX9 242 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 BOD1Q96IK1 185 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 LRIG1Q96JA1 1093 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 CNPPD1Q9BV87 410 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 SIK2Q9H0K1 926 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 ETAA1Q9NY74 926 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 TPCN1Q9ULQ1 816 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 FZD1Q9UP38 647 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 HS3ST4Q9Y661 456 aa6.67□□□□□ -1.34
USP48-209ENST00000487880 ISM1B1AKI9 464 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 ZFPL1O95159 310 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 ABHD16AO95870 558 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 SLC7A1P30825 629 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 ZNF844Q08AG5 666 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 TAPT1Q6NXT6 567 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 CPEB3Q8NE35 698 aaKnown RBP6.66□□□□□ -1.34
USP48-209ENST00000487880 PJA1Q8NG27 643 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 ZNF483Q8TF39 744 aaPredicted RBP6.66□□□□□ -1.34
USP48-209ENST00000487880 NACC2Q96BF6 587 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 ZNF747Q9BV97 191 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 TMEM74BQ9NUR3 256 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 RNF181Q9P0P0 153 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 PCDHGB6Q9Y5F9 930 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP48-209ENST00000487880 USP19O94966 1318 aa6.66□□□□□ -1.34
USP48-209ENST00000487880 CCDC195A0A1B0GUA6 201 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 A0A1W2PS29 197 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 APAF1O14727 1248 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 MATN3O15232 486 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 MGEA5O60502 916 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 PPFIA4O75335 1185 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 SUN1O94901 812 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 KIF20AO95235 890 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 NDUFA10O95299 355 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 MYL1P05976 194 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 HLA-DOAP06340 250 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 THP07101 528 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 SLC5A1P13866 664 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 PHKG2P15735 406 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 KCNA2P16389 499 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 LAG3P18627 525 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 DDX6P26196 483 aaKnown RBP eCLIP6.65□□□□□ -1.34
USP48-209ENST00000487880 KCNJ5P48544 419 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 TOB1P50616 345 aaPredicted RBP6.65□□□□□ -1.34
USP48-209ENST00000487880 CYP2A13Q16696 494 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 COBLL1Q53SF7 1204 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 PPP4R4Q6NUP7 873 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 FOXR2Q6PJQ5 311 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 POC1BQ8TC44 478 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 SUCLG2Q96I99 432 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 TRIB1Q96RU8 372 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 LRRC27Q9C0I9 530 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 BTBD1Q9H0C5 482 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 SMURF2Q9HAU4 748 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 STK32BQ9NY57 414 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 MAP3K2Q9Y2U5 619 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 NEU2Q9Y3R4 380 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 PLEKHM1Q9Y4G2 1056 aa6.65□□□□□ -1.34
USP48-209ENST00000487880 ANO9A1A5B4 782 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms