RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 TMEM270Q6UE05 265 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 RAD9BQ6WBX8 426 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 VPS36Q86VN1 386 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 ZSCAN30Q86W11 494 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 ZNF677Q86XU0 584 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 TMEM175Q9BSA9 504 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 SYT11Q9BT88 431 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 SDCBP2Q9H190 292 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 KCND1Q9NSA2 647 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 BARX2Q9UMQ3 279 aaPredicted RBP13.37□□□□□ -0.27
IFT88-206ENST00000482172 SNX9Q9Y5X1 595 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 ARHGEF37A1IGU5 675 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 CARNS1A5YM72 827 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 EIF3CLB5ME19 914 aaKnown RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 SPTLC1O15269 473 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 HUS1O60921 280 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 CILPO75339 1184 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 DDHD2O94830 711 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 NDUFA10O95299 355 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 PLEKP08567 350 aaPredicted RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 PAEPP09466 180 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 ACRP10323 421 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 CYP11B1P15538 503 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 USP8P40818 1118 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 PDE6CP51160 858 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 RNASELQ05823 741 aaKnown RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 ZNF571Q7Z3V5 609 aaPredicted RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 UNC93AQ86WB7 457 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 TMEM86AQ8N2M4 240 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 RBBP8NLQ8NC74 664 aaPredicted RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 APPL2Q8NEU8 664 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 KIAA1524Q8TCG1 905 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 ZNF689Q96CS4 500 aaPredicted RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 EIF3CQ99613 913 aaKnown RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 DNAI2Q9GZS0 605 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 DEF6Q9H4E7 631 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 SMYD3Q9H7B4 428 aa13.36□□□□□ -0.27
IFT88-206ENST00000482172 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 NOCTQ9UK39 431 aaKnown RBP13.36□□□□□ -0.27
IFT88-206ENST00000482172 SCN1AP35498 2009 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 TBKBP1A7MCY6 615 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 M0QZQ0 153 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 CYB561D2O14569 222 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 CCP110O43303 1012 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 AKR1B10O60218 316 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 B3GAT3O94766 335 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 CD58P19256 250 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
IFT88-206ENST00000482172 KIF11P52732 1056 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 CDH8P55286 799 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 KRT83P78385 493 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 SLC18A3Q16572 532 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 SOWAHAQ2M3V2 549 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 CD300LGQ6UXG3 332 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 SLC47A2Q86VL8 602 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 C3orf58Q8NDZ4 430 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 WHAMMQ8TF30 809 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 AGPAT1Q99943 283 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 NRDE2Q9H7Z3 1164 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 KIAA1257Q9ULG3 409 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 PYCARDQ9ULZ3 195 aa13.35□□□□□ -0.27
IFT88-206ENST00000482172 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 FNDC1Q4ZHG4 1894 aaPredicted RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 GABRDO14764 452 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 UPP2O95045 317 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 IPO7O95373 1038 aaKnown RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 ALDH2P05091 517 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 CYP11A1P05108 521 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 TNFAIP3P21580 790 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 RAP1GAPP47736 663 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 GATMP50440 423 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 RAD23BP54727 409 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 CDR2Q01850 454 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 MTF1Q14872 753 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 SPA17Q15506 151 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 TIGD5Q53EQ6 642 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 C10orf76Q5T2E6 689 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 NOP9Q86U38 636 aaKnown RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 CMTR2Q8IYT2 770 aaKnown RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 SLC30A5Q8TAD4 765 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 PHOSPHO2Q8TCD6 241 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 HERVK_113Q902F9 699 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 DDX1Q92499 740 aaKnown RBP13.34□□□□□ -0.27
IFT88-206ENST00000482172 DPF3Q92784 378 aa13.34□□□□□ -0.27
IFT88-206ENST00000482172 TMEM176AQ96HP8 235 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms