RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.46□□□□□ -1.06
VMA21-203ENST00000477649 ARHGEF26Q96DR7 871 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 RHOXF2Q9BQY4 288 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 NUP85Q9BW27 656 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 OSGEPQ9NPF4 335 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 CISHQ9NSE2 258 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 SETD4Q9NVD3 440 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 PARVAQ9NVD7 372 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 FAM53CQ9NYF3 392 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 TAS2R14Q9NYV8 317 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 FLRT1Q9NZU1 646 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 STIM2Q9P246 746 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 WDR35Q9P2L0 1181 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 ALG6Q9Y672 507 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 MCM3APO60318 1980 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 SPOPO43791 374 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 CABYRO75952 493 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 CST3P01034 146 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 GJB1P08034 283 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 MYL3P08590 195 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 RARBP10826 455 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 CYBAP13498 195 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 MMP8P22894 467 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 PAX3P23760 479 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 CXCR5P32302 372 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 CTNNA1P35221 906 aaKnown RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 PSMC4P43686 418 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 ASPAP45381 313 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 GSCP56915 257 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 RWDD2BP57060 319 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 NOMO3P69849 1222 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 LACTBP83111 547 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 PURAQ00577 322 aaKnown RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 CUL1Q13616 776 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 SLC10A6Q3KNW5 377 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 BEND6Q5SZJ8 279 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 SEL1L2Q5TEA6 688 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 JADE1Q6IE81 842 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 PLEKHA7Q6IQ23 1121 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 EMBQ6PCB8 327 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 CCNI2Q6ZMN8 369 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 MON1BQ7L1V2 547 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 SESTD1Q86VW0 696 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 PALB2Q86YC2 1186 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 C1orf127Q8N9H9 656 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 BEST2Q8NFU1 509 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 ZNF606Q8WXB4 792 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 ZSWIM1Q9BR11 485 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 FAM129AQ9BZQ8 928 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 TRIM6Q9C030 488 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 GPBP1L1Q9HC44 474 aaPredicted RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 CHST12Q9NRB3 414 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 HOMER3Q9NSC5 361 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 ADAM22Q9P0K1 906 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 IP6K2Q9UHH9 426 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 MTUS1Q9ULD2 1270 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 UBQLN1Q9UMX0 589 aaKnown RBP8.45□□□□□ -1.06
VMA21-203ENST00000477649 L1RE1Q9UN81 338 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 PCDHA3Q9Y5H8 950 aa8.45□□□□□ -1.06
VMA21-203ENST00000477649 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 KRIT1O00522 736 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 MAP2K7O14733 419 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 KIF3CO14782 793 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 TLR3O15455 904 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 DDX3YO15523 660 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 ADCY6O43306 1168 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PSTPIP1O43586 416 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 CAND2O75155 1236 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PROSCO94903 275 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 HMGCRP04035 888 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 NFICP08651 508 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 KRT19P08727 400 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 VDRP11473 427 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 KCNE1P15382 129 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 CYP3A5P20815 502 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 COMTP21964 271 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 CST5P28325 142 aaPredicted RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 HOXA11P31270 313 aaPredicted RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 EPHB4P54760 987 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 VSNL1P62760 191 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PTPN11Q06124 597 aaPredicted RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 C2orf54Q08AI8 447 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 INCA1Q0VD86 236 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PAK2Q13177 524 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 DHX34Q14147 1143 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 MESDQ14696 234 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 ACAP1Q15027 740 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 SNX17Q15036 470 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 KIZQ2M2Z5 673 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 WDR72Q3MJ13 1102 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 SEZ6Q53EL9 994 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 XKR4Q5GH76 650 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PRAMEF19Q5SWL8 479 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 LRRC38Q5VT99 294 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 NAA35Q5VZE5 725 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 SPOPLQ6IQ16 392 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 UNC93AQ86WB7 457 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 PCSK9Q8NBP7 692 aaKnown RBP8.44□□□□□ -1.06
VMA21-203ENST00000477649 CD101Q93033 1021 aa8.44□□□□□ -1.06
VMA21-203ENST00000477649 HPDLQ96IR7 371 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms