RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 MMS19Q96T76 1030 aa30.82■■■□□ 2.52
VEGFA-211ENST00000476772 TMEM106CQ9BVX2 250 aa30.82■■■□□ 2.52
VEGFA-211ENST00000476772 UBN1Q9NPG3 1134 aa30.82■■■□□ 2.52
VEGFA-211ENST00000476772 SNX9Q9Y5X1 595 aa30.82■■■□□ 2.52
VEGFA-211ENST00000476772 KIF5CO60282 957 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 GNG11P61952 73 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 ZNF677Q86XU0 584 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 SEPT8Q92599 483 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 TBX21Q9UL17 535 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 FAM170AA1A519 330 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 CYP2C18P33260 490 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 FAM189BP81408 668 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 LRRC26Q2I0M4 334 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 SMYD5Q6GMV2 418 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 ZNF592Q92610 1267 aa30.81■■■□□ 2.52
VEGFA-211ENST00000476772 PNPLA4P41247 253 aa30.8■■■□□ 2.52
VEGFA-211ENST00000476772 CACNG4Q9UBN1 327 aa30.8■■■□□ 2.52
VEGFA-211ENST00000476772 INPP5FQ9Y2H2 1132 aa30.8■■■□□ 2.52
VEGFA-211ENST00000476772 ATP8B3O60423 1300 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 TET1Q8NFU7 2136 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 MACROD2A1Z1Q3 448 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 SPTLC1O15269 473 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 THAP12O43422 761 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 EOMESO95936 686 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 TUBB4AP04350 444 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 H2AFZP0C0S5 128 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 TAF6P49848 677 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 TCTN1Q2MV58 587 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 H2AFVQ71UI9 128 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 WHAMMQ8TF30 809 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 WDR24Q96S15 920 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 HMGXB4Q9UGU5 601 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 PUF60Q9UHX1 559 aaKnown RBP30.79■■■□□ 2.52
VEGFA-211ENST00000476772 DNAI1Q9UI46 699 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 PAXBP1Q9Y5B6 917 aa30.79■■■□□ 2.52
VEGFA-211ENST00000476772 KIAA0100Q14667 2235 aaKnown RBP30.79■■■□□ 2.52
VEGFA-211ENST00000476772 TDRD15B5MCY1 1934 aaKnown RBP30.78■■■□□ 2.52
VEGFA-211ENST00000476772 CILPO75339 1184 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 POMCP01189 267 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 APBB2Q92870 758 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 TWNKQ96RR1 684 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 TMEM39AQ9NV64 488 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 FANCGO15287 622 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 CXCL10P02778 98 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 GALCP54803 685 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 INCA1Q0VD86 236 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 SV2CQ496J9 727 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 ZNF569Q5MCW4 686 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 SALL4Q9UJQ4 1053 aa30.78■■■□□ 2.52
VEGFA-211ENST00000476772 KPNA7A9QM74 516 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 ENPP3O14638 875 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 PARNO95453 639 aaKnown RBP30.77■■■□□ 2.52
VEGFA-211ENST00000476772 CLTBP09497 229 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 RAD23BP54727 409 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 GRIK3Q13003 919 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 ORC1Q13415 861 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 NECAB2Q7Z6G3 386 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 SECISBP2LQ93073 1101 aaKnown RBP30.77■■■□□ 2.52
VEGFA-211ENST00000476772 ELOVL4Q9GZR5 314 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 ISCUQ9H1K1 167 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 INTUQ9ULD6 942 aa30.77■■■□□ 2.52
VEGFA-211ENST00000476772 BARX2Q9UMQ3 279 aaPredicted RBP30.77■■■□□ 2.52
VEGFA-211ENST00000476772 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.77■■■□□ 2.52
VEGFA-211ENST00000476772 INPPL1O15357 1258 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 CFHP08603 1231 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 GZMAP12544 262 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 BRD2P25440 801 aaKnown RBP30.76■■■□□ 2.51
VEGFA-211ENST00000476772 SSTR3P32745 418 aaPredicted RBP30.76■■■□□ 2.51
VEGFA-211ENST00000476772 LILRA4P59901 499 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 ZNF606Q8WXB4 792 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 MRPL45Q9BRJ2 306 aaKnown RBP30.76■■■□□ 2.51
VEGFA-211ENST00000476772 MCOLN1Q9GZU1 580 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 FAM124BQ9H5Z6 455 aaPredicted RBP30.76■■■□□ 2.51
VEGFA-211ENST00000476772 GDAP2Q9NXN4 497 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 MYO1AQ9UBC5 1043 aa30.76■■■□□ 2.51
VEGFA-211ENST00000476772 CASTOR2A6NHX0 329 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 RTN2O75298 545 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 CLCNKBP51801 687 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 CLEC16AQ2KHT3 1053 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 CLLU1OSQ5K130 101 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.75■■■□□ 2.51
VEGFA-211ENST00000476772 SLC35F6Q8N357 371 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 SLC4A11Q8NBS3 891 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 ZSWIM1Q9BR11 485 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 PDCL3Q9H2J4 239 aa30.75■■■□□ 2.51
VEGFA-211ENST00000476772 PODXLO00592 558 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 FTLP02792 175 aaPredicted RBP30.74■■■□□ 2.51
VEGFA-211ENST00000476772 PAEPP09466 180 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 ABCB4P21439 1286 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 IGFBP6P24592 240 aaPredicted RBP30.74■■■□□ 2.51
VEGFA-211ENST00000476772 NDST1P52848 882 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 SOWAHAQ2M3V2 549 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 GLB1LQ6UWU2 654 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 DEFB128Q7Z7B8 93 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 TTC39CQ8N584 583 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 TFAP2BQ92481 460 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 TMEM161AQ9NX61 479 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 MOCS3O95396 460 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 FGFR1P11362 822 aa30.74■■■□□ 2.51
VEGFA-211ENST00000476772 KIF18AQ8NI77 898 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms