RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 SOX4Q06945 474 aaPredicted RBP9.79□□□□□ -0.84
SMG5-203ENST00000473643 TUSC3Q13454 348 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 SMAD4Q13485 552 aaKnown RBP9.79□□□□□ -0.84
SMG5-203ENST00000473643 EXOC3L4Q17RC7 722 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 GLRA4Q5JXX5 417 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 LMBRD2Q68DH5 695 aaPredicted RBP9.79□□□□□ -0.84
SMG5-203ENST00000473643 SMYD5Q6GMV2 418 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 DPY19L2P1Q6NXN4 242 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 GBP6Q6ZN66 633 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 TMC7Q7Z402 723 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 GJD3Q8N144 294 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 FBXL13Q8NEE6 735 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 TAS1R2Q8TE23 839 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 BCL7CQ8WUZ0 217 aaPredicted RBP9.79□□□□□ -0.84
SMG5-203ENST00000473643 TAF4BQ92750 862 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 C18orf25Q96B23 403 aaPredicted RBP9.79□□□□□ -0.84
SMG5-203ENST00000473643 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
SMG5-203ENST00000473643 TMEM169Q96HH4 297 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 MRFAP1L1Q96HT8 127 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 UROC1Q96N76 676 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 TRIM5Q9C035 493 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 MTMR12Q9C0I1 747 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 VRTNQ9H8Y1 702 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 ENTPD7Q9NQZ7 604 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 STK39Q9UEW8 545 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 PRKAG3Q9UGI9 489 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 TUBGCP4Q9UGJ1 667 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 SIX4Q9UIU6 781 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 CD207Q9UJ71 328 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 SIK3Q9Y2K2 1263 aa9.79□□□□□ -0.84
SMG5-203ENST00000473643 TCF20Q9UGU0 1960 aaKnown RBP9.78□□□□□ -0.84
SMG5-203ENST00000473643 C2orf71A6NGG8 1288 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 NRP1O14786 923 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 LILRB3O75022 631 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 CXCL14O95715 111 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 EFEMP2O95967 443 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
SMG5-203ENST00000473643 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 ITGB3P05106 788 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 CTSAP10619 480 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 PON1P27169 355 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 ZNF75DP51815 510 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 RBM10P98175 930 aaKnown RBP9.78□□□□□ -0.84
SMG5-203ENST00000473643 MYL7Q01449 175 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 ZP2Q05996 745 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 BIRC3Q13489 604 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 NCOA4Q13772 614 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 SMC1AQ14683 1233 aaKnown RBP9.78□□□□□ -0.84
SMG5-203ENST00000473643 CLUL1Q15846 466 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 FIGNQ5HY92 759 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 PLPP4Q5VZY2 271 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 C9orf57Q5W0N0 161 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 SCARA3Q6AZY7 606 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 COLGALT2Q8IYK4 626 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 VPS52Q8N1B4 723 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 LRRC52Q8N7C0 313 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 SMRP1Q8NCR6 262 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 SEMA4DQ92854 862 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 FAM84AQ96KN4 292 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 FAM193BQ96PV7 902 aaPredicted RBP9.78□□□□□ -0.84
SMG5-203ENST00000473643 VN1R3Q9BXE9 311 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 ZBP1Q9H171 429 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 XYLT2Q9H1B5 865 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 MMRN2Q9H8L6 949 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 PLCB1Q9NQ66 1216 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 FBXL5Q9UKA1 691 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 FAN1Q9Y2M0 1017 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 DAAM1Q9Y4D1 1078 aa9.78□□□□□ -0.84
SMG5-203ENST00000473643 TMEM189-UBE2V1I3L0A0 370 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 PES1O00541 588 aaKnown RBP9.77□□□□□ -0.85
SMG5-203ENST00000473643 CLASP2O75122 1294 aaKnown RBP9.77□□□□□ -0.85
SMG5-203ENST00000473643 PHACTR2O75167 634 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 ADCY5O95622 1261 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 FAM163BP0C2L3 166 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 SLC9A1P19634 815 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 CDC25BP30305 580 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 POLR2BP30876 1174 aaKnown RBP9.77□□□□□ -0.85
SMG5-203ENST00000473643 PNPLA4P41247 253 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 GUCY2FP51841 1108 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 TRPC3Q13507 836 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 BMS1Q14692 1282 aaKnown RBP9.77□□□□□ -0.85
SMG5-203ENST00000473643 SYCP1Q15431 976 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 UPP1Q16831 310 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 TRIM65Q6PJ69 517 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 DCLRE1AQ6PJP8 1040 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 CD300LGQ6UXG3 332 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 VSTM4Q8IW00 320 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 ADHFE1Q8IWW8 467 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 SUSD6Q92537 303 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 KHSRPQ92945 711 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMG5-203ENST00000473643 IQCDQ96DY2 449 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 EDEM3Q9BZQ6 932 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 INTS2Q9H0H0 1204 aaKnown RBP9.77□□□□□ -0.85
SMG5-203ENST00000473643 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 EPHX3Q9H6B9 360 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 SIX2Q9NPC8 291 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 GCNT4Q9P109 453 aa9.77□□□□□ -0.85
SMG5-203ENST00000473643 BARX2Q9UMQ3 279 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms