RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 DNAJC25Q9H1X3 360 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 ASB7Q9H672 318 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 C2CD2Q9Y426 696 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 F5P12259 2224 aa20.37■□□□□ 0.85
CCDC88B-206ENST00000473405 K7ELQ4 463 aaPredicted RBP20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 ODC1P11926 461 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 CASP5P51878 434 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 PRKCQQ04759 706 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 GPR17Q13304 367 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 MYBPC2Q14324 1141 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 IQCEQ6IPM2 695 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 SV2BQ7L1I2 683 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 EFCAB13Q8IY85 973 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 TTC9BQ8N6N2 239 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 ZNF512Q96ME7 567 aaPredicted RBP20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 ZSWIM3Q96MP5 696 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 ASB16Q96NS5 453 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 TMEM209Q96SK2 561 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 FGFBP2Q9BYJ0 223 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 MRPL44Q9H9J2 332 aaKnown RBP20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 OLFML3Q9NRN5 406 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 TBC1D7Q9P0N9 293 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 MTF2Q9Y483 593 aaPredicted RBP20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 OTOGLQ3ZCN5 2332 aa20.36■□□□□ 0.85
CCDC88B-206ENST00000473405 NCANO14594 1321 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 KANSL1LA0AUZ9 987 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 FRMD3A2A2Y4 597 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 MTMR11A4FU01 709 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 STX6O43752 255 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 GJA1P17302 382 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 GAP43P17677 238 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 PAX3P23760 479 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 WNT7BP56706 349 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 POU5F1Q01860 360 aaKnown RBP20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 DUSP4Q13115 394 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 CYP4A22Q5TCH4 519 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 CENPPQ6IPU0 288 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 CCDC73Q6ZRK6 1079 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 TMC8Q8IU68 726 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 LEMD2Q8NC56 503 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 OR10T2Q8NGX3 314 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 POMGNT1Q8WZA1 660 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 LRRC3Q9BY71 257 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 ASAH2Q9NR71 780 aa20.35■□□□□ 0.85
CCDC88B-206ENST00000473405 SHISA7A6NL88 538 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 CYP11A1P05108 521 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 MYL4P12829 197 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 CD72P21854 359 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 STAT6P42226 847 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 NASPP49321 788 aaPredicted RBP20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 ATAD1Q8NBU5 361 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 ZSWIM2Q8NEG5 633 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 SHKBP1Q8TBC3 707 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 NKD2Q969F2 451 aaPredicted RBP20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 ZSCAN16Q9H4T2 348 aaPredicted RBP20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 CACNA1AO00555 2505 aa20.34■□□□□ 0.85
CCDC88B-206ENST00000473405 DENND4CQ5VZ89 1909 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 OBSL1O75147 1896 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 PLD1Q13393 1074 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 GRM2Q14416 872 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 TPRG1Q6ZUI0 275 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 C1orf210Q8IVY1 113 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 MAML2Q8IZL2 1156 aaPredicted RBP20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 SMARCD2Q92925 531 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 PANK2Q9BZ23 570 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 ZFP14Q9HCL3 533 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 LTB4R2Q9NPC1 389 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 HEBP1Q9NRV9 189 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 DPP3Q9NY33 737 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 SLC27A5Q9Y2P5 690 aa20.33■□□□□ 0.85
CCDC88B-206ENST00000473405 SOAT2O75908 522 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 IL18RAPO95256 599 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 GCNT3O95395 438 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 IDEP14735 1019 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 UBXN2BQ14CS0 331 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 POSTNQ15063 836 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 TEAD2Q15562 447 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 VITQ6UXI7 678 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 PDILTQ8N807 584 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 LINC00301Q8NCQ3 95 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 ZSCAN18Q8TBC5 510 aaPredicted RBP20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 DNASE1L2Q92874 299 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 BORCS6Q96GS4 357 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 ACCSQ96QU6 501 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 FAM213AQ9BRX8 229 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 OSBPL6Q9BZF3 934 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 TRPV4Q9HBA0 871 aa20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 KIF26AQ9ULI4 1882 aaPredicted RBP20.32■□□□□ 0.84
CCDC88B-206ENST00000473405 A0A1W2PRU2 124 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 VIPR2P41587 438 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 TAF6P49848 677 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 EPHB3P54753 998 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 SLC39A12Q504Y0 691 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 ARMCX5Q6P1M9 558 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 BRSK2Q8IWQ3 736 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 PYM1Q9BRP8 204 aaKnown RBP20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 ZCWPW1Q9H0M4 648 aa20.31■□□□□ 0.84
CCDC88B-206ENST00000473405 HSFX1Q9UBD0 423 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms